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Cluster: BF040_bin.48_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_467393 k141_467393_19 19986 20966 - 9.B.157.1.1
TC k141_467393 k141_467393_20 21128 23098 - 2.A.2.3.5
CAZyme k141_467393 k141_467393_21 23195 24052 - CE4
pfam k141_467393 k141_467393_22 24117 25235 - RF-1 | PCRF
TC k141_467393 k141_467393_23 25411 26769 + 2.A.45.2.2
TC k141_467393 k141_467393_24 26782 27375 + 2.A.115.2.14
NULL(UNKNOWN) k141_467393 k141_467393_25 27748 27987 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_467393 k141_467393_26 28022 29437 + VanZ
CAZyme k141_467393 k141_467393_27 29509 30936 - GT5
pfam k141_467393 k141_467393_28 30949 32070 - NTP_transferase | Hexapep_GlmU
pfam k141_467393 k141_467393_29 32073 33278 - NTP_transferase | Hexapep_GlmU
CAZyme k141_467393 k141_467393_30 33297 35351 - CBM48 | GH13_9
Gene ID: k141_467393_19
Type: TC
Location: 19986 - 20966 (-)
Gene ID: k141_467393_20
Type: TC
Location: 21128 - 23098 (-)
Gene ID: k141_467393_21
Type: CAZyme
Location: 23195 - 24052 (-)
Gene ID: k141_467393_22
Type: pfam
Location: 24117 - 25235 (-)
Gene ID: k141_467393_23
Type: TC
Location: 25411 - 26769 (+)
Gene ID: k141_467393_24
Type: TC
Location: 26782 - 27375 (+)
Gene ID: k141_467393_25
Type:
Location: 27748 - 27987 (+)
Gene ID: k141_467393_26
Type: pfam
Location: 28022 - 29437 (+)
Gene ID: k141_467393_27
Type: CAZyme
Location: 29509 - 30936 (-)
Gene ID: k141_467393_28
Type: pfam
Location: 30949 - 32070 (-)
Gene ID: k141_467393_29
Type: pfam
Location: 32073 - 33278 (-)
Gene ID: k141_467393_30
Type: CAZyme
Location: 33297 - 35351 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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