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Cluster: BF035_10_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_398702 k141_398702_24 24823 27012 + GH36
TF k141_398702 k141_398702_25 27021 27917 - HTH_AraC
TF k141_398702 k141_398702_26 28013 29026 + LacI
TC k141_398702 k141_398702_27 29283 30662 + 3.A.1.1.21
TC k141_398702 k141_398702_28 30734 31723 + 3.A.1.1.34
TC k141_398702 k141_398702_29 31726 32571 + 3.A.1.1.18
CAZyme k141_398702 k141_398702_30 32599 33612 + GH130_2
pfam k141_398702 k141_398702_31 33635 34879 + GlcNAc_2-epim
CAZyme k141_398702 k141_398702_32 34872 36041 + GH130_1
CAZyme k141_398702 k141_398702_33 36114 37631 + CE20
Gene ID: k141_398702_24
Type: CAZyme
Location: 24823 - 27012 (+)
Gene ID: k141_398702_25
Type: TF
Location: 27021 - 27917 (-)
Gene ID: k141_398702_26
Type: TF
Location: 28013 - 29026 (+)
Gene ID: k141_398702_27
Type: TC
Location: 29283 - 30662 (+)
Gene ID: k141_398702_28
Type: TC
Location: 30734 - 31723 (+)
Gene ID: k141_398702_29
Type: TC
Location: 31726 - 32571 (+)
Gene ID: k141_398702_30
Type: CAZyme
Location: 32599 - 33612 (+)
Gene ID: k141_398702_31
Type: pfam
Location: 33635 - 34879 (+)
Gene ID: k141_398702_32
Type: CAZyme
Location: 34872 - 36041 (+)
Gene ID: k141_398702_33
Type: CAZyme
Location: 36114 - 37631 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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