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Cluster: BF029_bin.41_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_385881 k141_385881_9 9776 10966 - 3.A.1.122.2
TC k141_385881 k141_385881_10 10963 11634 - 3.A.1.122.2
pfam k141_385881 k141_385881_11 11645 13264 - HlyD_3
CAZyme k141_385881 k141_385881_12 13433 14968 + GH25
NULL(UNKNOWN) k141_385881 k141_385881_13 15341 15805 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_385881 k141_385881_14 15949 17103 - GH3
TC k141_385881 k141_385881_15 17103 18452 - 2.A.66.1.33
pfam k141_385881 k141_385881_16 18607 19173 + Chromate_transp
TC k141_385881 k141_385881_17 19170 19727 + 2.A.51.1.6
peptidase k141_385881 k141_385881_18 19789 20652 + M38.UPW
peptidase k141_385881 k141_385881_19 20642 21199 + M95.UPW
CAZyme k141_385881 k141_385881_20 21283 22413 + CE9
TC k141_385881 k141_385881_21 22521 23900 + 2.A.66.1.28
pfam k141_385881 k141_385881_22 23960 24385 - VanZ
TC k141_385881 k141_385881_23 24382 24948 - 2.A.107.1.2
Gene ID: k141_385881_9
Type: TC
Location: 9776 - 10966 (-)
Gene ID: k141_385881_10
Type: TC
Location: 10963 - 11634 (-)
Gene ID: k141_385881_11
Type: pfam
Location: 11645 - 13264 (-)
Gene ID: k141_385881_12
Type: CAZyme
Location: 13433 - 14968 (+)
Gene ID: k141_385881_13
Type:
Location: 15341 - 15805 (+)
Gene ID: k141_385881_14
Type: CAZyme
Location: 15949 - 17103 (-)
Gene ID: k141_385881_15
Type: TC
Location: 17103 - 18452 (-)
Gene ID: k141_385881_16
Type: pfam
Location: 18607 - 19173 (+)
Gene ID: k141_385881_17
Type: TC
Location: 19170 - 19727 (+)
Gene ID: k141_385881_18
Type: peptidase
Location: 19789 - 20652 (+)
Gene ID: k141_385881_19
Type: peptidase
Location: 20642 - 21199 (+)
Gene ID: k141_385881_20
Type: CAZyme
Location: 21283 - 22413 (+)
Gene ID: k141_385881_21
Type: TC
Location: 22521 - 23900 (+)
Gene ID: k141_385881_22
Type: pfam
Location: 23960 - 24385 (-)
Gene ID: k141_385881_23
Type: TC
Location: 24382 - 24948 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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