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Cluster: BF029_bin.41_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_117224 k141_117224_10 11671 13953 + GH3
TC k141_117224 k141_117224_11 15321 16352 + 3.A.1.2.3
TC k141_117224 k141_117224_12 16622 18139 + 3.A.1.2.3
TC k141_117224 k141_117224_13 18160 19176 + 3.A.1.2.3
NULL(UNKNOWN) k141_117224 k141_117224_14 19183 19386 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_117224 k141_117224_15 19512 20822 - Asp_aminotransf
TC k141_117224 k141_117224_16 20976 22793 - 2.A.16.2.2
TC k141_117224 k141_117224_17 23221 24489 + 2.A.114.1.4
Gene ID: k141_117224_10
Type: CAZyme
Location: 11671 - 13953 (+)
Gene ID: k141_117224_11
Type: TC
Location: 15321 - 16352 (+)
Gene ID: k141_117224_12
Type: TC
Location: 16622 - 18139 (+)
Gene ID: k141_117224_13
Type: TC
Location: 18160 - 19176 (+)
Gene ID: k141_117224_14
Type:
Location: 19183 - 19386 (+)
Gene ID: k141_117224_15
Type: pfam
Location: 19512 - 20822 (-)
Gene ID: k141_117224_16
Type: TC
Location: 20976 - 22793 (-)
Gene ID: k141_117224_17
Type: TC
Location: 23221 - 24489 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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