Cluster: BF021_42_CGC1
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 10
- Substrate: pectin
- Genome ID: BF021_42
- CGC Family ID: CGCFAM_01075
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_12044 | k141_12044_3 | 3146 | 4945 | + | GH5_5 |
| pfam | k141_12044 | k141_12044_4 | 5025 | 5786 | + | Lipase_GDSL | Lipase_GDSL_2 |
| TC | k141_12044 | k141_12044_5 | 5783 | 9031 | + | 1.B.14.6.1 |
| pfam | k141_12044 | k141_12044_6 | 9107 | 10867 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_12044 | k141_12044_7 | 10909 | 12105 | + | SGBP_B_XBD |
| CAZyme | k141_12044 | k141_12044_8 | 12112 | 13224 | + | GH5_5 |
| CAZyme | k141_12044 | k141_12044_9 | 13224 | 14189 | + | GH5_2 |
| CAZyme | k141_12044 | k141_12044_10 | 14380 | 16920 | + | GH2 |
| CAZyme | k141_12044 | k141_12044_11 | 16979 | 17935 | + | GH5_5 |
| CAZyme | k141_12044 | k141_12044_12 | 17985 | 19325 | + | GH140 |
| CAZyme | k141_12044 | k141_12044_13 | 19339 | 20505 | + | GH130_1 |
| TC | k141_12044 | k141_12044_14 | 20515 | 21888 | + | 2.A.2.3.6 |
| CAZyme | k141_12044 | k141_12044_15 | 21885 | 24470 | + | CBM67 | GH78 |
| CAZyme | k141_12044 | k141_12044_16 | 24467 | 26398 | + | CE20 | CE20 |
| NULL(UNKNOWN) | k141_12044 | k141_12044_17 | 26487 | 27212 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_12044 | k141_12044_18 | 27263 | 29194 | + | GH172 |
Gene ID: k141_12044_3
Type: CAZyme
Location: 3146 - 4945 (+)
Type: CAZyme
Location: 3146 - 4945 (+)
Gene ID: k141_12044_4
Type: pfam
Location: 5025 - 5786 (+)
Type: pfam
Location: 5025 - 5786 (+)
Gene ID: k141_12044_5
Type: TC
Location: 5783 - 9031 (+)
Type: TC
Location: 5783 - 9031 (+)
Gene ID: k141_12044_6
Type: pfam
Location: 9107 - 10867 (+)
Type: pfam
Location: 9107 - 10867 (+)
Gene ID: k141_12044_7
Type: pfam
Location: 10909 - 12105 (+)
Type: pfam
Location: 10909 - 12105 (+)
Gene ID: k141_12044_8
Type: CAZyme
Location: 12112 - 13224 (+)
Type: CAZyme
Location: 12112 - 13224 (+)
Gene ID: k141_12044_9
Type: CAZyme
Location: 13224 - 14189 (+)
Type: CAZyme
Location: 13224 - 14189 (+)
Gene ID: k141_12044_10
Type: CAZyme
Location: 14380 - 16920 (+)
Type: CAZyme
Location: 14380 - 16920 (+)
Gene ID: k141_12044_11
Type: CAZyme
Location: 16979 - 17935 (+)
Type: CAZyme
Location: 16979 - 17935 (+)
Gene ID: k141_12044_12
Type: CAZyme
Location: 17985 - 19325 (+)
Type: CAZyme
Location: 17985 - 19325 (+)
Gene ID: k141_12044_13
Type: CAZyme
Location: 19339 - 20505 (+)
Type: CAZyme
Location: 19339 - 20505 (+)
Gene ID: k141_12044_14
Type: TC
Location: 20515 - 21888 (+)
Type: TC
Location: 20515 - 21888 (+)
Gene ID: k141_12044_15
Type: CAZyme
Location: 21885 - 24470 (+)
Type: CAZyme
Location: 21885 - 24470 (+)
Gene ID: k141_12044_16
Type: CAZyme
Location: 24467 - 26398 (+)
Type: CAZyme
Location: 24467 - 26398 (+)
Gene ID: k141_12044_17
Type:
Location: 26487 - 27212 (+)
Type:
Location: 26487 - 27212 (+)
Gene ID: k141_12044_18
Type: CAZyme
Location: 27263 - 29194 (+)
Type: CAZyme
Location: 27263 - 29194 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Bacteroides_F
Species
Bacteroides_F pectinophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.