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Cluster: BF005_44_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_154221 k141_154221_2 1308 2708 - 2.A.40.7.6
STP k141_154221 k141_154221_3 2721 3260 - Pribosyltran
pfam k141_154221 k141_154221_4 3484 4251 + ThiF
CAZyme k141_154221 k141_154221_5 4251 5216 + GH26
TF k141_154221 k141_154221_6 5251 6126 - HTH_AraC | HTH_AraC
pfam k141_154221 k141_154221_7 6147 6977 - SpoU_methylase
CAZyme k141_154221 k141_154221_8 7216 9036 + GH5_4
TF k141_154221 k141_154221_9 9054 9926 - HTH_1
TC k141_154221 k141_154221_10 10190 11911 + 3.A.1.135.5
TC k141_154221 k141_154221_11 11912 13678 + 3.A.1.135.5
Gene ID: k141_154221_2
Type: TC
Location: 1308 - 2708 (-)
Gene ID: k141_154221_3
Type: STP
Location: 2721 - 3260 (-)
Gene ID: k141_154221_4
Type: pfam
Location: 3484 - 4251 (+)
Gene ID: k141_154221_5
Type: CAZyme
Location: 4251 - 5216 (+)
Gene ID: k141_154221_6
Type: TF
Location: 5251 - 6126 (-)
Gene ID: k141_154221_7
Type: pfam
Location: 6147 - 6977 (-)
Gene ID: k141_154221_8
Type: CAZyme
Location: 7216 - 9036 (+)
Gene ID: k141_154221_9
Type: TF
Location: 9054 - 9926 (-)
Gene ID: k141_154221_10
Type: TC
Location: 10190 - 11911 (+)
Gene ID: k141_154221_11
Type: TC
Location: 11912 - 13678 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_154221_10 vegetarian > vegan 1.19732 0.01057

🧭 Explore Read Mapping of CGC

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