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Cluster: BF005_44_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_208622 k141_208622_27 28036 28833 + 3.A.1.134.4
TC k141_208622 k141_208622_28 28830 30836 + 3.A.1.134.9
STP k141_208622 k141_208622_29 30880 32196 - Citrate_synt
TF k141_208622 k141_208622_30 32220 32669 - MarR
CAZyme k141_208622 k141_208622_31 32801 33478 + GT51
pfam k141_208622 k141_208622_32 33576 34562 + Lipase_GDSL | Lipase_GDSL_2
pfam k141_208622 k141_208622_33 34659 35267 + Hydrolase | HAD
TC k141_208622 k141_208622_34 35446 37260 + 9.B.34.1.2
TC k141_208622 k141_208622_35 37513 39021 + 8.A.7.1.1
Gene ID: k141_208622_27
Type: TC
Location: 28036 - 28833 (+)
Gene ID: k141_208622_28
Type: TC
Location: 28830 - 30836 (+)
Gene ID: k141_208622_29
Type: STP
Location: 30880 - 32196 (-)
Gene ID: k141_208622_30
Type: TF
Location: 32220 - 32669 (-)
Gene ID: k141_208622_31
Type: CAZyme
Location: 32801 - 33478 (+)
Gene ID: k141_208622_32
Type: pfam
Location: 33576 - 34562 (+)
Gene ID: k141_208622_33
Type: pfam
Location: 34659 - 35267 (+)
Gene ID: k141_208622_34
Type: TC
Location: 35446 - 37260 (+)
Gene ID: k141_208622_35
Type: TC
Location: 37513 - 39021 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_208622_27 vegetarian > vegan 1.27138 0.01277

🧭 Explore Read Mapping of CGC

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