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Cluster: BF005_44_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_310682 k141_310682_33 35050 35784 + 3.A.1.122.14
NULL(UNKNOWN) k141_310682 k141_310682_34 35768 38890 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_310682 k141_310682_35 38903 40294 + 3.A.1.122.2
CAZyme k141_310682 k141_310682_36 40408 43068 + GH2
STP k141_310682 k141_310682_37 43161 43679 + Nitroreductase | Nitroreductase
NULL(UNKNOWN) k141_310682 k141_310682_38 43616 43840 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_310682 k141_310682_39 44094 46481 + 9.A.8.1.6
pfam k141_310682 k141_310682_40 46666 47136 - tRNA_edit
pfam k141_310682 k141_310682_41 47193 48140 - SUFBD_core
TC k141_310682 k141_310682_42 48133 48906 - 3.A.1.6.7
Gene ID: k141_310682_33
Type: TC
Location: 35050 - 35784 (+)
Gene ID: k141_310682_34
Type:
Location: 35768 - 38890 (+)
Gene ID: k141_310682_35
Type: TC
Location: 38903 - 40294 (+)
Gene ID: k141_310682_36
Type: CAZyme
Location: 40408 - 43068 (+)
Gene ID: k141_310682_37
Type: STP
Location: 43161 - 43679 (+)
Gene ID: k141_310682_38
Type:
Location: 43616 - 43840 (-)
Gene ID: k141_310682_39
Type: TC
Location: 44094 - 46481 (+)
Gene ID: k141_310682_40
Type: pfam
Location: 46666 - 47136 (-)
Gene ID: k141_310682_41
Type: pfam
Location: 47193 - 48140 (-)
Gene ID: k141_310682_42
Type: TC
Location: 48133 - 48906 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_310682_33 vegetarian > vegan 1.58295 0.01057
k141_310682_42 vegetarian > vegan 1.53948 0.02728

🧭 Explore Read Mapping of CGC

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