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Cluster: B97.bin_2_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B97_contig_230 B97_contig_230_53 45291 46142 + GH166
STP B97_contig_230 B97_contig_230_54 46173 46475 + Response_reg
TC B97_contig_230 B97_contig_230_55 47055 48059 + 2.A.28.2.4
NULL(UNKNOWN) B97_contig_230 B97_contig_230_56 48052 48594 + NULL(UNKNOWN)
[View Structural Homologs]
TF B97_contig_230 B97_contig_230_57 48603 49508 - HTH_AraC
CAZyme B97_contig_230 B97_contig_230_58 49756 53025 + GH59
Gene ID: B97_contig_230_53
Type: CAZyme
Location: 45291 - 46142 (+)
Gene ID: B97_contig_230_54
Type: STP
Location: 46173 - 46475 (+)
Gene ID: B97_contig_230_55
Type: TC
Location: 47055 - 48059 (+)
Gene ID: B97_contig_230_56
Type:
Location: 48052 - 48594 (+)
Gene ID: B97_contig_230_57
Type: TF
Location: 48603 - 49508 (-)
Gene ID: B97_contig_230_58
Type: CAZyme
Location: 49756 - 53025 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B97_contig_230_54 vegan > omnivore 1.61977 0.00279
B97_contig_230_55 vegan > omnivore 1.57350 0.00279

🧭 Explore Read Mapping of CGC

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