Cluster: B95.CMAG_1_CGC8
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: B95.CMAG_1
- CGC Family ID: CGCFAM_02628
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B95_contig_2440 | B95_contig_2440_1739 | 2202689 | 2203768 | + | GT9 |
| TC | B95_contig_2440 | B95_contig_2440_1740 | 2203755 | 2204702 | - | 2.A.7.3.19 |
| TC | B95_contig_2440 | B95_contig_2440_1741 | 2204712 | 2206427 | - | 3.A.1.106.1 |
| CAZyme | B95_contig_2440 | B95_contig_2440_1742 | 2206617 | 2207561 | + | GT9 |
| CAZyme | B95_contig_2440 | B95_contig_2440_1743 | 2207558 | 2208352 | + | GT2 |
| pfam | B95_contig_2440 | B95_contig_2440_1744 | 2208324 | 2209991 | - | SMC_N | AAA_23 |
| pfam | B95_contig_2440 | B95_contig_2440_1745 | 2210006 | 2210893 | - | NAD_kinase | NAD_kinase_C |
| CAZyme | B95_contig_2440 | B95_contig_2440_1746 | 2210911 | 2211693 | - | GT2 |
| pfam | B95_contig_2440 | B95_contig_2440_1747 | 2211791 | 2212582 | - | adh_short | adh_short_C2 |
| CAZyme | B95_contig_2440 | B95_contig_2440_1748 | 2212782 | 2214893 | - | GH23 |
Gene ID: B95_contig_2440_1739
Type: CAZyme
Location: 2202689 - 2203768 (+)
Type: CAZyme
Location: 2202689 - 2203768 (+)
Gene ID: B95_contig_2440_1740
Type: TC
Location: 2203755 - 2204702 (-)
Type: TC
Location: 2203755 - 2204702 (-)
Gene ID: B95_contig_2440_1741
Type: TC
Location: 2204712 - 2206427 (-)
Type: TC
Location: 2204712 - 2206427 (-)
Gene ID: B95_contig_2440_1742
Type: CAZyme
Location: 2206617 - 2207561 (+)
Type: CAZyme
Location: 2206617 - 2207561 (+)
Gene ID: B95_contig_2440_1743
Type: CAZyme
Location: 2207558 - 2208352 (+)
Type: CAZyme
Location: 2207558 - 2208352 (+)
Gene ID: B95_contig_2440_1744
Type: pfam
Location: 2208324 - 2209991 (-)
Type: pfam
Location: 2208324 - 2209991 (-)
Gene ID: B95_contig_2440_1745
Type: pfam
Location: 2210006 - 2210893 (-)
Type: pfam
Location: 2210006 - 2210893 (-)
Gene ID: B95_contig_2440_1746
Type: CAZyme
Location: 2210911 - 2211693 (-)
Type: CAZyme
Location: 2210911 - 2211693 (-)
Gene ID: B95_contig_2440_1747
Type: pfam
Location: 2211791 - 2212582 (-)
Type: pfam
Location: 2211791 - 2212582 (-)
Gene ID: B95_contig_2440_1748
Type: CAZyme
Location: 2212782 - 2214893 (-)
Type: CAZyme
Location: 2212782 - 2214893 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Sutterella
Species
Sutterella wadsworthensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B95_contig_2440_1740 | vegan > omnivore | 1.04967 | 0.00241 |
| B95_contig_2440_1741 | vegan > omnivore | 1.59750 | 0.00241 |
| B95_contig_2440_1742 | vegan > omnivore | 1.06166 | 0.00241 |
| B95_contig_2440_1743 | vegan > omnivore | 1.33494 | 0.00241 |
| B95_contig_2440_1744 | vegan > omnivore | 1.01842 | 0.00241 |
| B95_contig_2440_1747 | vegetarian > omnivore | 1.00091 | 0.00957 |
| B95_contig_2440_1747 | vegan > omnivore | 1.48979 | 0.00241 |
| B95_contig_2440_1748 | vegan > omnivore | 1.00131 | 0.00241 |