dbCAN HGM

Cluster: B95.CMAG_1_CGC4

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	B95_contig_2440	B95_contig_2440_454	523239	524363	-	GT104
pfam	B95_contig_2440	B95_contig_2440_455	524457	527630	-	DUF2157 \| GDYXXLXY
TC	B95_contig_2440	B95_contig_2440_456	527757	528410	-	4.F.1.1.8
pfam	B95_contig_2440	B95_contig_2440_457	528460	530520	-	GIY-YIG \| UVR \| UvrC_RNaseH_dom \| HHH_5 \| UvrC_RNaseH
NULL(UNKNOWN)	B95_contig_2440	B95_contig_2440_458	530544	530969	-	NULL(UNKNOWN) [View Structural Homologs]
TC	B95_contig_2440	B95_contig_2440_459	531288	532019	+	3.A.1.107.3
TC	B95_contig_2440	B95_contig_2440_460	532037	532705	+	3.A.1.107.4
TC	B95_contig_2440	B95_contig_2440_461	532756	533484	+	9.B.14.2.4
pfam	B95_contig_2440	B95_contig_2440_462	533481	533669	+	CcmD
pfam	B95_contig_2440	B95_contig_2440_463	533703	534221	+	CcmE
TC	B95_contig_2440	B95_contig_2440_464	534421	536418	+	9.B.14.1.7

Gene ID: B95_contig_2440_454
Type: CAZyme
Location: 523239 - 524363 (-)

Gene ID: B95_contig_2440_455
Type: pfam
Location: 524457 - 527630 (-)

Gene ID: B95_contig_2440_456
Type: TC
Location: 527757 - 528410 (-)

Gene ID: B95_contig_2440_457
Type: pfam
Location: 528460 - 530520 (-)

Gene ID: B95_contig_2440_458
Type:
Location: 530544 - 530969 (-)

Gene ID: B95_contig_2440_459
Type: TC
Location: 531288 - 532019 (+)

Gene ID: B95_contig_2440_460
Type: TC
Location: 532037 - 532705 (+)

Gene ID: B95_contig_2440_461
Type: TC
Location: 532756 - 533484 (+)

Gene ID: B95_contig_2440_462
Type: pfam
Location: 533481 - 533669 (+)

Gene ID: B95_contig_2440_463
Type: pfam
Location: 533703 - 534221 (+)

Gene ID: B95_contig_2440_464
Type: TC
Location: 534421 - 536418 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
B95_contig_2440_454	vegan > omnivore	1.37080	0.00241
B95_contig_2440_462	vegan > omnivore	1.14447	0.00241

Gene ID	Condition Pair	log2FC	FDR P-value
B95_contig_2440_456	vegan > omnivore	1.41159	0.04397
B95_contig_2440_459	vegan > omnivore	1.19176	0.04397
B95_contig_2440_460	vegan > omnivore	1.24695	0.04397
B95_contig_2440_462	vegan > omnivore	1.31126	0.04397
B95_contig_2440_463	vegan > omnivore	1.36945	0.04397

Gene ID	Condition Pair	log2FC	FDR P-value
B95_contig_2440_454	UC > CD	17.15082	0.00565
B95_contig_2440_454	nonIBD > CD	18.57902	0.00224
B95_contig_2440_454	nonIBD > UC	1.42820	0.03116
B95_contig_2440_455	nonIBD > CD	18.51045	0.00224
B95_contig_2440_455	UC > CD	17.63929	0.00565
B95_contig_2440_456	nonIBD > CD	19.04883	0.00224
B95_contig_2440_456	UC > CD	18.08359	0.00565
B95_contig_2440_457	nonIBD > CD	3.01644	0.00224
B95_contig_2440_457	UC > CD	3.18551	0.00565
B95_contig_2440_458	UC > CD	16.90914	0.00565
B95_contig_2440_458	nonIBD > CD	18.90782	0.00224
B95_contig_2440_458	nonIBD > UC	1.99868	0.03116
B95_contig_2440_459	UC > CD	18.16075	0.00565
B95_contig_2440_459	nonIBD > UC	1.08069	0.03116
B95_contig_2440_459	nonIBD > CD	19.24144	0.00224
B95_contig_2440_460	nonIBD > CD	1.32773	0.00224
B95_contig_2440_461	UC > CD	19.32117	0.00565
B95_contig_2440_461	nonIBD > CD	19.32290	0.00224
B95_contig_2440_462	nonIBD > CD	19.50296	0.00224
B95_contig_2440_462	UC > CD	18.89217	0.00565
B95_contig_2440_463	nonIBD > CD	1.56053	0.00224
B95_contig_2440_463	nonIBD > UC	1.18899	0.03116