Cluster: B93.CMAG_1_CGC39
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: B93.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B93_contig_2161 | B93_contig_2161_2124 | 2632752 | 2635631 | - | GT10 |
| NULL(UNKNOWN) | B93_contig_2161 | B93_contig_2161_2125 | 2635702 | 2636469 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B93_contig_2161 | B93_contig_2161_2126 | 2636554 | 2639781 | - | GT10 |
| CAZyme | B93_contig_2161 | B93_contig_2161_2127 | 2639760 | 2642120 | - | GT6 |
| CAZyme | B93_contig_2161 | B93_contig_2161_2128 | 2642133 | 2644388 | - | GT11 | GT31 |
| pfam | B93_contig_2161 | B93_contig_2161_2129 | 2644406 | 2645452 | - | Glycos_transf_1 | Glyco_trans_1_4 |
| NULL(UNKNOWN) | B93_contig_2161 | B93_contig_2161_2130 | 2645703 | 2645861 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B93_contig_2161 | B93_contig_2161_2131 | 2646086 | 2646343 | + | 3.A.2.1.1 |
Gene ID: B93_contig_2161_2124
Type: CAZyme
Location: 2632752 - 2635631 (-)
Type: CAZyme
Location: 2632752 - 2635631 (-)
Gene ID: B93_contig_2161_2125
Type:
Location: 2635702 - 2636469 (-)
Type:
Location: 2635702 - 2636469 (-)
Gene ID: B93_contig_2161_2126
Type: CAZyme
Location: 2636554 - 2639781 (-)
Type: CAZyme
Location: 2636554 - 2639781 (-)
Gene ID: B93_contig_2161_2127
Type: CAZyme
Location: 2639760 - 2642120 (-)
Type: CAZyme
Location: 2639760 - 2642120 (-)
Gene ID: B93_contig_2161_2128
Type: CAZyme
Location: 2642133 - 2644388 (-)
Type: CAZyme
Location: 2642133 - 2644388 (-)
Gene ID: B93_contig_2161_2129
Type: pfam
Location: 2644406 - 2645452 (-)
Type: pfam
Location: 2644406 - 2645452 (-)
Gene ID: B93_contig_2161_2130
Type:
Location: 2645703 - 2645861 (+)
Type:
Location: 2645703 - 2645861 (+)
Gene ID: B93_contig_2161_2131
Type: TC
Location: 2646086 - 2646343 (+)
Type: TC
Location: 2646086 - 2646343 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.