Cluster: B93.CMAG_1_CGC37
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 11
- Substrate:
- Genome ID: B93.CMAG_1
- CGC Family ID: CGCFAM_01178
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B93_contig_2161 | B93_contig_2161_2014 | 2497744 | 2498436 | + | 9.B.18.1.2 |
| TC | B93_contig_2161 | B93_contig_2161_2015 | 2498433 | 2499215 | + | 1.B.18.3.2 |
| TC | B93_contig_2161 | B93_contig_2161_2016 | 2499287 | 2501656 | + | 8.A.3.1.2 |
| pfam | B93_contig_2161 | B93_contig_2161_2017 | 2501723 | 2502328 | + | CpsB_CapC |
| CAZyme | B93_contig_2161 | B93_contig_2161_2018 | 2502383 | 2503159 | + | GT2 |
| CAZyme | B93_contig_2161 | B93_contig_2161_2019 | 2503202 | 2504350 | + | GT4 |
| CAZyme | B93_contig_2161 | B93_contig_2161_2020 | 2504353 | 2505540 | + | GT4 |
| CAZyme | B93_contig_2161 | B93_contig_2161_2021 | 2505555 | 2506697 | + | GT4 |
| CAZyme | B93_contig_2161 | B93_contig_2161_2022 | 2506720 | 2507892 | + | GT4 |
| NULL(UNKNOWN) | B93_contig_2161 | B93_contig_2161_2023 | 2507889 | 2508872 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B93_contig_2161 | B93_contig_2161_2024 | 2508889 | 2510100 | + | Wzy_C |
| CAZyme | B93_contig_2161 | B93_contig_2161_2025 | 2510087 | 2511238 | + | GT4 |
| CAZyme | B93_contig_2161 | B93_contig_2161_2026 | 2511235 | 2512371 | + | GT4 |
| CAZyme | B93_contig_2161 | B93_contig_2161_2027 | 2512368 | 2513549 | + | GT4 |
| NULL(UNKNOWN) | B93_contig_2161 | B93_contig_2161_2028 | 2513572 | 2515152 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | B93_contig_2161 | B93_contig_2161_2029 | 2515187 | 2515726 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B93_contig_2161 | B93_contig_2161_2030 | 2515730 | 2516578 | + | GT2 |
| CAZyme | B93_contig_2161 | B93_contig_2161_2031 | 2516602 | 2517606 | + | GT2 |
| pfam | B93_contig_2161 | B93_contig_2161_2032 | 2517656 | 2518693 | + | Acyl_transf_3 |
| CAZyme | B93_contig_2161 | B93_contig_2161_2033 | 2518690 | 2519712 | + | GT2 |
Gene ID: B93_contig_2161_2014
Type: TC
Location: 2497744 - 2498436 (+)
Type: TC
Location: 2497744 - 2498436 (+)
Gene ID: B93_contig_2161_2015
Type: TC
Location: 2498433 - 2499215 (+)
Type: TC
Location: 2498433 - 2499215 (+)
Gene ID: B93_contig_2161_2016
Type: TC
Location: 2499287 - 2501656 (+)
Type: TC
Location: 2499287 - 2501656 (+)
Gene ID: B93_contig_2161_2017
Type: pfam
Location: 2501723 - 2502328 (+)
Type: pfam
Location: 2501723 - 2502328 (+)
Gene ID: B93_contig_2161_2018
Type: CAZyme
Location: 2502383 - 2503159 (+)
Type: CAZyme
Location: 2502383 - 2503159 (+)
Gene ID: B93_contig_2161_2019
Type: CAZyme
Location: 2503202 - 2504350 (+)
Type: CAZyme
Location: 2503202 - 2504350 (+)
Gene ID: B93_contig_2161_2020
Type: CAZyme
Location: 2504353 - 2505540 (+)
Type: CAZyme
Location: 2504353 - 2505540 (+)
Gene ID: B93_contig_2161_2021
Type: CAZyme
Location: 2505555 - 2506697 (+)
Type: CAZyme
Location: 2505555 - 2506697 (+)
Gene ID: B93_contig_2161_2022
Type: CAZyme
Location: 2506720 - 2507892 (+)
Type: CAZyme
Location: 2506720 - 2507892 (+)
Gene ID: B93_contig_2161_2023
Type:
Location: 2507889 - 2508872 (+)
Type:
Location: 2507889 - 2508872 (+)
Gene ID: B93_contig_2161_2024
Type: pfam
Location: 2508889 - 2510100 (+)
Type: pfam
Location: 2508889 - 2510100 (+)
Gene ID: B93_contig_2161_2025
Type: CAZyme
Location: 2510087 - 2511238 (+)
Type: CAZyme
Location: 2510087 - 2511238 (+)
Gene ID: B93_contig_2161_2026
Type: CAZyme
Location: 2511235 - 2512371 (+)
Type: CAZyme
Location: 2511235 - 2512371 (+)
Gene ID: B93_contig_2161_2027
Type: CAZyme
Location: 2512368 - 2513549 (+)
Type: CAZyme
Location: 2512368 - 2513549 (+)
Gene ID: B93_contig_2161_2028
Type:
Location: 2513572 - 2515152 (+)
Type:
Location: 2513572 - 2515152 (+)
Gene ID: B93_contig_2161_2029
Type:
Location: 2515187 - 2515726 (+)
Type:
Location: 2515187 - 2515726 (+)
Gene ID: B93_contig_2161_2030
Type: CAZyme
Location: 2515730 - 2516578 (+)
Type: CAZyme
Location: 2515730 - 2516578 (+)
Gene ID: B93_contig_2161_2031
Type: CAZyme
Location: 2516602 - 2517606 (+)
Type: CAZyme
Location: 2516602 - 2517606 (+)
Gene ID: B93_contig_2161_2032
Type: pfam
Location: 2517656 - 2518693 (+)
Type: pfam
Location: 2517656 - 2518693 (+)
Gene ID: B93_contig_2161_2033
Type: CAZyme
Location: 2518690 - 2519712 (+)
Type: CAZyme
Location: 2518690 - 2519712 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.