Cluster: B93.CMAG_1_CGC36
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: B93.CMAG_1
- CGC Family ID: CGCFAM_07550
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B93_contig_2161 | B93_contig_2161_1908 | 2375586 | 2377835 | - | AA1 |
| TC | B93_contig_2161 | B93_contig_2161_1909 | 2377977 | 2378861 | - | 2.A.7.3.1 |
| NULL(UNKNOWN) | B93_contig_2161 | B93_contig_2161_1910 | 2379156 | 2380208 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B93_contig_2161 | B93_contig_2161_1911 | 2380771 | 2381874 | + | Ala_racemase_C | Ala_racemase_N |
| TC | B93_contig_2161 | B93_contig_2161_1912 | 2382283 | 2383290 | - | 3.A.1.5.20 |
| TC | B93_contig_2161 | B93_contig_2161_1913 | 2383310 | 2384287 | - | 3.A.1.5.12 |
| STP | B93_contig_2161 | B93_contig_2161_1914 | 2384291 | 2386537 | - | SBP_bac_5 |
| TC | B93_contig_2161 | B93_contig_2161_1915 | 2386563 | 2388170 | - | 3.A.1.5.21 |
| TC | B93_contig_2161 | B93_contig_2161_1916 | 2388176 | 2389564 | - | 3.A.1.5.32 |
Gene ID: B93_contig_2161_1908
Type: CAZyme
Location: 2375586 - 2377835 (-)
Type: CAZyme
Location: 2375586 - 2377835 (-)
Gene ID: B93_contig_2161_1909
Type: TC
Location: 2377977 - 2378861 (-)
Type: TC
Location: 2377977 - 2378861 (-)
Gene ID: B93_contig_2161_1910
Type:
Location: 2379156 - 2380208 (+)
Type:
Location: 2379156 - 2380208 (+)
Gene ID: B93_contig_2161_1911
Type: pfam
Location: 2380771 - 2381874 (+)
Type: pfam
Location: 2380771 - 2381874 (+)
Gene ID: B93_contig_2161_1912
Type: TC
Location: 2382283 - 2383290 (-)
Type: TC
Location: 2382283 - 2383290 (-)
Gene ID: B93_contig_2161_1913
Type: TC
Location: 2383310 - 2384287 (-)
Type: TC
Location: 2383310 - 2384287 (-)
Gene ID: B93_contig_2161_1914
Type: STP
Location: 2384291 - 2386537 (-)
Type: STP
Location: 2384291 - 2386537 (-)
Gene ID: B93_contig_2161_1915
Type: TC
Location: 2386563 - 2388170 (-)
Type: TC
Location: 2386563 - 2388170 (-)
Gene ID: B93_contig_2161_1916
Type: TC
Location: 2388176 - 2389564 (-)
Type: TC
Location: 2388176 - 2389564 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.