Cluster: B93.CMAG_1_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: B93.CMAG_1
- CGC Family ID: CGCFAM_03460
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B93_contig_2161 | B93_contig_2161_1729 | 2154132 | 2155646 | - | GH20 |
| CAZyme | B93_contig_2161 | B93_contig_2161_1730 | 2155681 | 2157216 | - | GH20 |
| pfam | B93_contig_2161 | B93_contig_2161_1731 | 2157861 | 2158325 | - | SocA_Panacea |
| TC | B93_contig_2161 | B93_contig_2161_1732 | 2158709 | 2163280 | + | 1.B.12.4.2 |
| TC | B93_contig_2161 | B93_contig_2161_1733 | 2163412 | 2166909 | + | 1.B.12.4.2 |
Gene ID: B93_contig_2161_1729
Type: CAZyme
Location: 2154132 - 2155646 (-)
Type: CAZyme
Location: 2154132 - 2155646 (-)
Gene ID: B93_contig_2161_1730
Type: CAZyme
Location: 2155681 - 2157216 (-)
Type: CAZyme
Location: 2155681 - 2157216 (-)
Gene ID: B93_contig_2161_1731
Type: pfam
Location: 2157861 - 2158325 (-)
Type: pfam
Location: 2157861 - 2158325 (-)
Gene ID: B93_contig_2161_1732
Type: TC
Location: 2158709 - 2163280 (+)
Type: TC
Location: 2158709 - 2163280 (+)
Gene ID: B93_contig_2161_1733
Type: TC
Location: 2163412 - 2166909 (+)
Type: TC
Location: 2163412 - 2166909 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B93_contig_2161_1731 | vegetarian > vegan | 1.10608 | 0.02737 |