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Cluster: B93.CMAG_1_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B93_contig_2161 B93_contig_2161_1232 1528364 1529113 - 3.A.1.3.15
TC B93_contig_2161 B93_contig_2161_1233 1529106 1530590 - 3.A.1.3.17
CAZyme B93_contig_2161 B93_contig_2161_1234 1530751 1531821 - GT2
pfam B93_contig_2161 B93_contig_2161_1235 1532214 1533374 + EpsG
CAZyme B93_contig_2161 B93_contig_2161_1236 1533371 1534489 + GT4
TC B93_contig_2161 B93_contig_2161_1237 1534486 1535097 + 9.B.18.1.2
pfam B93_contig_2161 B93_contig_2161_1238 1535094 1536881 + Aminotran_1_2 | DegT_DnrJ_EryC1 | Beta_elim_lyase | PglD_N
TC B93_contig_2161 B93_contig_2161_1239 1536893 1538875 + 9.B.18.2.1
TC B93_contig_2161 B93_contig_2161_1240 1538894 1539679 + 1.B.18.3.1
TC B93_contig_2161 B93_contig_2161_1241 1539684 1542065 + 8.A.3.3.4
CAZyme B93_contig_2161 B93_contig_2161_1242 1542087 1543220 + GT4
CAZyme B93_contig_2161 B93_contig_2161_1243 1543217 1544365 + GT4
CAZyme B93_contig_2161 B93_contig_2161_1244 1544372 1545397 + GT2
pfam B93_contig_2161 B93_contig_2161_1245 1545390 1546553 + PS_pyruv_trans
CAZyme B93_contig_2161 B93_contig_2161_1246 1546550 1547740 + GH105
TC B93_contig_2161 B93_contig_2161_1247 1547737 1549251 + 2.A.66.1.40
CAZyme B93_contig_2161 B93_contig_2161_1248 1549278 1550435 + GT4
CAZyme B93_contig_2161 B93_contig_2161_1249 1550437 1551552 + GT4
CAZyme B93_contig_2161 B93_contig_2161_1250 1551498 1552589 + GT2
CAZyme B93_contig_2161 B93_contig_2161_1251 1552607 1553704 + GT4
CAZyme B93_contig_2161 B93_contig_2161_1252 1553701 1554591 + GT2
CAZyme B93_contig_2161 B93_contig_2161_1253 1554597 1555757 + GT4
CAZyme B93_contig_2161 B93_contig_2161_1254 1555777 1556844 + GT2
Gene ID: B93_contig_2161_1232
Type: TC
Location: 1528364 - 1529113 (-)
Gene ID: B93_contig_2161_1233
Type: TC
Location: 1529106 - 1530590 (-)
Gene ID: B93_contig_2161_1234
Type: CAZyme
Location: 1530751 - 1531821 (-)
Gene ID: B93_contig_2161_1235
Type: pfam
Location: 1532214 - 1533374 (+)
Gene ID: B93_contig_2161_1236
Type: CAZyme
Location: 1533371 - 1534489 (+)
Gene ID: B93_contig_2161_1237
Type: TC
Location: 1534486 - 1535097 (+)
Gene ID: B93_contig_2161_1238
Type: pfam
Location: 1535094 - 1536881 (+)
Gene ID: B93_contig_2161_1239
Type: TC
Location: 1536893 - 1538875 (+)
Gene ID: B93_contig_2161_1240
Type: TC
Location: 1538894 - 1539679 (+)
Gene ID: B93_contig_2161_1241
Type: TC
Location: 1539684 - 1542065 (+)
Gene ID: B93_contig_2161_1242
Type: CAZyme
Location: 1542087 - 1543220 (+)
Gene ID: B93_contig_2161_1243
Type: CAZyme
Location: 1543217 - 1544365 (+)
Gene ID: B93_contig_2161_1244
Type: CAZyme
Location: 1544372 - 1545397 (+)
Gene ID: B93_contig_2161_1245
Type: pfam
Location: 1545390 - 1546553 (+)
Gene ID: B93_contig_2161_1246
Type: CAZyme
Location: 1546550 - 1547740 (+)
Gene ID: B93_contig_2161_1247
Type: TC
Location: 1547737 - 1549251 (+)
Gene ID: B93_contig_2161_1248
Type: CAZyme
Location: 1549278 - 1550435 (+)
Gene ID: B93_contig_2161_1249
Type: CAZyme
Location: 1550437 - 1551552 (+)
Gene ID: B93_contig_2161_1250
Type: CAZyme
Location: 1551498 - 1552589 (+)
Gene ID: B93_contig_2161_1251
Type: CAZyme
Location: 1552607 - 1553704 (+)
Gene ID: B93_contig_2161_1252
Type: CAZyme
Location: 1553701 - 1554591 (+)
Gene ID: B93_contig_2161_1253
Type: CAZyme
Location: 1554597 - 1555757 (+)
Gene ID: B93_contig_2161_1254
Type: CAZyme
Location: 1555777 - 1556844 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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