Cluster: B93.CMAG_1_CGC20
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: B93.CMAG_1
- CGC Family ID: CGCFAM_02549
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B93_contig_2161 | B93_contig_2161_792 | 981438 | 982538 | - | GT8 |
| CAZyme | B93_contig_2161 | B93_contig_2161_793 | 982561 | 983649 | - | GT8 |
| CAZyme | B93_contig_2161 | B93_contig_2161_794 | 984207 | 985307 | + | GT2 |
| CAZyme | B93_contig_2161 | B93_contig_2161_795 | 985314 | 986402 | + | GT2 |
| CAZyme | B93_contig_2161 | B93_contig_2161_796 | 986565 | 987650 | + | GT2 |
| CAZyme | B93_contig_2161 | B93_contig_2161_797 | 987647 | 988723 | + | GT2 |
| peptidase | B93_contig_2161 | B93_contig_2161_798 | 988799 | 989362 | - | C56.UNW |
| pfam | B93_contig_2161 | B93_contig_2161_799 | 989426 | 990466 | - | Biotin_lipoyl | E3_binding |
| CAZyme | B93_contig_2161 | B93_contig_2161_800 | 990554 | 991702 | - | CE9 |
| NULL(UNKNOWN) | B93_contig_2161 | B93_contig_2161_801 | 991763 | 992011 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B93_contig_2161 | B93_contig_2161_802 | 992031 | 992624 | - | 3.D.1.8.1 |
| pfam | B93_contig_2161 | B93_contig_2161_803 | 992783 | 994126 | - | MFS_1 |
| TC | B93_contig_2161 | B93_contig_2161_804 | 994131 | 995756 | - | 2.A.114.1.4 |
Gene ID: B93_contig_2161_792
Type: CAZyme
Location: 981438 - 982538 (-)
Type: CAZyme
Location: 981438 - 982538 (-)
Gene ID: B93_contig_2161_793
Type: CAZyme
Location: 982561 - 983649 (-)
Type: CAZyme
Location: 982561 - 983649 (-)
Gene ID: B93_contig_2161_794
Type: CAZyme
Location: 984207 - 985307 (+)
Type: CAZyme
Location: 984207 - 985307 (+)
Gene ID: B93_contig_2161_795
Type: CAZyme
Location: 985314 - 986402 (+)
Type: CAZyme
Location: 985314 - 986402 (+)
Gene ID: B93_contig_2161_796
Type: CAZyme
Location: 986565 - 987650 (+)
Type: CAZyme
Location: 986565 - 987650 (+)
Gene ID: B93_contig_2161_797
Type: CAZyme
Location: 987647 - 988723 (+)
Type: CAZyme
Location: 987647 - 988723 (+)
Gene ID: B93_contig_2161_798
Type: peptidase
Location: 988799 - 989362 (-)
Type: peptidase
Location: 988799 - 989362 (-)
Gene ID: B93_contig_2161_799
Type: pfam
Location: 989426 - 990466 (-)
Type: pfam
Location: 989426 - 990466 (-)
Gene ID: B93_contig_2161_800
Type: CAZyme
Location: 990554 - 991702 (-)
Type: CAZyme
Location: 990554 - 991702 (-)
Gene ID: B93_contig_2161_801
Type:
Location: 991763 - 992011 (-)
Type:
Location: 991763 - 992011 (-)
Gene ID: B93_contig_2161_802
Type: TC
Location: 992031 - 992624 (-)
Type: TC
Location: 992031 - 992624 (-)
Gene ID: B93_contig_2161_803
Type: pfam
Location: 992783 - 994126 (-)
Type: pfam
Location: 992783 - 994126 (-)
Gene ID: B93_contig_2161_804
Type: TC
Location: 994131 - 995756 (-)
Type: TC
Location: 994131 - 995756 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.