Cluster: B93.CMAG_1_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B93.CMAG_1
- CGC Family ID: CGCFAM_02550
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B93_contig_2161 | B93_contig_2161_505 | 617164 | 618402 | - | 2.A.3.6.4 |
| pfam | B93_contig_2161 | B93_contig_2161_506 | 618622 | 619287 | + | Hydrolase | HAD | HAD_2 |
| TC | B93_contig_2161 | B93_contig_2161_507 | 619347 | 620459 | + | 2.A.86.1.4 |
| pfam | B93_contig_2161 | B93_contig_2161_508 | 620463 | 621752 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| CAZyme | B93_contig_2161 | B93_contig_2161_509 | 622051 | 623577 | + | GH175 |
| CAZyme | B93_contig_2161 | B93_contig_2161_510 | 623770 | 625422 | + | GH20 |
Gene ID: B93_contig_2161_505
Type: TC
Location: 617164 - 618402 (-)
Type: TC
Location: 617164 - 618402 (-)
Gene ID: B93_contig_2161_506
Type: pfam
Location: 618622 - 619287 (+)
Type: pfam
Location: 618622 - 619287 (+)
Gene ID: B93_contig_2161_507
Type: TC
Location: 619347 - 620459 (+)
Type: TC
Location: 619347 - 620459 (+)
Gene ID: B93_contig_2161_508
Type: pfam
Location: 620463 - 621752 (+)
Type: pfam
Location: 620463 - 621752 (+)
Gene ID: B93_contig_2161_509
Type: CAZyme
Location: 622051 - 623577 (+)
Type: CAZyme
Location: 622051 - 623577 (+)
Gene ID: B93_contig_2161_510
Type: CAZyme
Location: 623770 - 625422 (+)
Type: CAZyme
Location: 623770 - 625422 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.