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Cluster: B89.bin_3_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B89_contig_1526 B89_contig_1526_381 346250 347794 + 2.A.17.1.7
NULL(UNKNOWN) B89_contig_1526 B89_contig_1526_382 347897 348139 + NULL(UNKNOWN)
[View Structural Homologs]
pfam B89_contig_1526 B89_contig_1526_383 348221 348541 + GmrSD_C
TC B89_contig_1526 B89_contig_1526_384 348801 350357 - 2.A.17.1.7
pfam B89_contig_1526 B89_contig_1526_385 350532 351020 - tRNA_edit
pfam B89_contig_1526 B89_contig_1526_386 351046 353895 - UvrA_DNA-bind | UvrA_inter
CAZyme B89_contig_1526 B89_contig_1526_387 353955 355733 + CBM50 | CBM50 | CBM50
Gene ID: B89_contig_1526_381
Type: TC
Location: 346250 - 347794 (+)
Gene ID: B89_contig_1526_382
Type:
Location: 347897 - 348139 (+)
Gene ID: B89_contig_1526_383
Type: pfam
Location: 348221 - 348541 (+)
Gene ID: B89_contig_1526_384
Type: TC
Location: 348801 - 350357 (-)
Gene ID: B89_contig_1526_385
Type: pfam
Location: 350532 - 351020 (-)
Gene ID: B89_contig_1526_386
Type: pfam
Location: 351046 - 353895 (-)
Gene ID: B89_contig_1526_387
Type: CAZyme
Location: 353955 - 355733 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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