Cluster: B89.bin_3_CGC52
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 7
- Substrate:
- Genome ID: B89.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B89_contig_1526 | B89_contig_1526_2587 | 3048271 | 3050505 | + | 8.A.3.3.2 |
| pfam | B89_contig_1526 | B89_contig_1526_2588 | 3050508 | 3051230 | + | CpsB_CapC |
| TC | B89_contig_1526 | B89_contig_1526_2589 | 3051193 | 3052734 | + | 2.A.66.1.40 |
| pfam | B89_contig_1526 | B89_contig_1526_2590 | 3052731 | 3053594 | + | PS_pyruv_trans |
| CAZyme | B89_contig_1526 | B89_contig_1526_2591 | 3053599 | 3054870 | + | GT4 |
| CAZyme | B89_contig_1526 | B89_contig_1526_2592 | 3054851 | 3055963 | + | GT4 |
| CAZyme | B89_contig_1526 | B89_contig_1526_2593 | 3055948 | 3056682 | + | CE14 |
| NULL(UNKNOWN) | B89_contig_1526 | B89_contig_1526_2594 | 3056682 | 3057803 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B89_contig_1526 | B89_contig_1526_2595 | 3057800 | 3058912 | + | GT4 |
| pfam | B89_contig_1526 | B89_contig_1526_2596 | 3058909 | 3060222 | + | Wzy_C |
| CAZyme | B89_contig_1526 | B89_contig_1526_2597 | 3060216 | 3061139 | + | GT2 |
| pfam | B89_contig_1526 | B89_contig_1526_2598 | 3061145 | 3061609 | + | Hexapep | Hexapep_2 |
| CAZyme | B89_contig_1526 | B89_contig_1526_2599 | 3061643 | 3062821 | + | GT4 |
| CAZyme | B89_contig_1526 | B89_contig_1526_2600 | 3062864 | 3063610 | + | GT26 |
| pfam | B89_contig_1526 | B89_contig_1526_2601 | 3063857 | 3064909 | + | NTP_transferase |
| TC | B89_contig_1526 | B89_contig_1526_2602 | 3065007 | 3066551 | + | 1.B.73.2.2 |
Gene ID: B89_contig_1526_2587
Type: TC
Location: 3048271 - 3050505 (+)
Type: TC
Location: 3048271 - 3050505 (+)
Gene ID: B89_contig_1526_2588
Type: pfam
Location: 3050508 - 3051230 (+)
Type: pfam
Location: 3050508 - 3051230 (+)
Gene ID: B89_contig_1526_2589
Type: TC
Location: 3051193 - 3052734 (+)
Type: TC
Location: 3051193 - 3052734 (+)
Gene ID: B89_contig_1526_2590
Type: pfam
Location: 3052731 - 3053594 (+)
Type: pfam
Location: 3052731 - 3053594 (+)
Gene ID: B89_contig_1526_2591
Type: CAZyme
Location: 3053599 - 3054870 (+)
Type: CAZyme
Location: 3053599 - 3054870 (+)
Gene ID: B89_contig_1526_2592
Type: CAZyme
Location: 3054851 - 3055963 (+)
Type: CAZyme
Location: 3054851 - 3055963 (+)
Gene ID: B89_contig_1526_2593
Type: CAZyme
Location: 3055948 - 3056682 (+)
Type: CAZyme
Location: 3055948 - 3056682 (+)
Gene ID: B89_contig_1526_2594
Type:
Location: 3056682 - 3057803 (+)
Type:
Location: 3056682 - 3057803 (+)
Gene ID: B89_contig_1526_2595
Type: CAZyme
Location: 3057800 - 3058912 (+)
Type: CAZyme
Location: 3057800 - 3058912 (+)
Gene ID: B89_contig_1526_2596
Type: pfam
Location: 3058909 - 3060222 (+)
Type: pfam
Location: 3058909 - 3060222 (+)
Gene ID: B89_contig_1526_2597
Type: CAZyme
Location: 3060216 - 3061139 (+)
Type: CAZyme
Location: 3060216 - 3061139 (+)
Gene ID: B89_contig_1526_2598
Type: pfam
Location: 3061145 - 3061609 (+)
Type: pfam
Location: 3061145 - 3061609 (+)
Gene ID: B89_contig_1526_2599
Type: CAZyme
Location: 3061643 - 3062821 (+)
Type: CAZyme
Location: 3061643 - 3062821 (+)
Gene ID: B89_contig_1526_2600
Type: CAZyme
Location: 3062864 - 3063610 (+)
Type: CAZyme
Location: 3062864 - 3063610 (+)
Gene ID: B89_contig_1526_2601
Type: pfam
Location: 3063857 - 3064909 (+)
Type: pfam
Location: 3063857 - 3064909 (+)
Gene ID: B89_contig_1526_2602
Type: TC
Location: 3065007 - 3066551 (+)
Type: TC
Location: 3065007 - 3066551 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp000436795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.