Cluster: B89.bin_3_CGC51
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: B89.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B89_contig_1526 | B89_contig_1526_2511 | 2943363 | 2946578 | + | 1.B.14.6.1 |
| TC | B89_contig_1526 | B89_contig_1526_2512 | 2946591 | 2948336 | + | 8.A.46.1.6 |
| pfam | B89_contig_1526 | B89_contig_1526_2513 | 2948371 | 2949939 | + | Big_2 | Big_2 | Big_2 | DUF4979 |
| pfam | B89_contig_1526 | B89_contig_1526_2514 | 2949969 | 2951354 | + | Alginate_lyase |
| CAZyme | B89_contig_1526 | B89_contig_1526_2515 | 2951614 | 2954748 | + | GH2 |
| pfam | B89_contig_1526 | B89_contig_1526_2516 | 2955130 | 2957403 | + | Hepar_II_III_C |
| NULL(UNKNOWN) | B89_contig_1526 | B89_contig_1526_2517 | 2957470 | 2959074 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B89_contig_1526 | B89_contig_1526_2518 | 2959207 | 2961138 | + | GH97 |
| CAZyme | B89_contig_1526 | B89_contig_1526_2519 | 2961212 | 2962438 | + | GH88 |
| sulfatase | B89_contig_1526 | B89_contig_1526_2520 | 2962467 | 2963261 | + | S1_2 |
| sulfatase | B89_contig_1526 | B89_contig_1526_2521 | 2963285 | 2964532 | + | S1_27 |
| TC | B89_contig_1526 | B89_contig_1526_2522 | 2964540 | 2965925 | + | 4.A.5.1.3 |
| pfam | B89_contig_1526 | B89_contig_1526_2523 | 2965973 | 2966896 | + | KduI |
| TC | B89_contig_1526 | B89_contig_1526_2524 | 2967295 | 2969985 | + | 1.B.14.12.3 |
Gene ID: B89_contig_1526_2511
Type: TC
Location: 2943363 - 2946578 (+)
Type: TC
Location: 2943363 - 2946578 (+)
Gene ID: B89_contig_1526_2512
Type: TC
Location: 2946591 - 2948336 (+)
Type: TC
Location: 2946591 - 2948336 (+)
Gene ID: B89_contig_1526_2513
Type: pfam
Location: 2948371 - 2949939 (+)
Type: pfam
Location: 2948371 - 2949939 (+)
Gene ID: B89_contig_1526_2514
Type: pfam
Location: 2949969 - 2951354 (+)
Type: pfam
Location: 2949969 - 2951354 (+)
Gene ID: B89_contig_1526_2515
Type: CAZyme
Location: 2951614 - 2954748 (+)
Type: CAZyme
Location: 2951614 - 2954748 (+)
Gene ID: B89_contig_1526_2516
Type: pfam
Location: 2955130 - 2957403 (+)
Type: pfam
Location: 2955130 - 2957403 (+)
Gene ID: B89_contig_1526_2517
Type:
Location: 2957470 - 2959074 (+)
Type:
Location: 2957470 - 2959074 (+)
Gene ID: B89_contig_1526_2518
Type: CAZyme
Location: 2959207 - 2961138 (+)
Type: CAZyme
Location: 2959207 - 2961138 (+)
Gene ID: B89_contig_1526_2519
Type: CAZyme
Location: 2961212 - 2962438 (+)
Type: CAZyme
Location: 2961212 - 2962438 (+)
Gene ID: B89_contig_1526_2520
Type: sulfatase
Location: 2962467 - 2963261 (+)
Type: sulfatase
Location: 2962467 - 2963261 (+)
Gene ID: B89_contig_1526_2521
Type: sulfatase
Location: 2963285 - 2964532 (+)
Type: sulfatase
Location: 2963285 - 2964532 (+)
Gene ID: B89_contig_1526_2522
Type: TC
Location: 2964540 - 2965925 (+)
Type: TC
Location: 2964540 - 2965925 (+)
Gene ID: B89_contig_1526_2523
Type: pfam
Location: 2965973 - 2966896 (+)
Type: pfam
Location: 2965973 - 2966896 (+)
Gene ID: B89_contig_1526_2524
Type: TC
Location: 2967295 - 2969985 (+)
Type: TC
Location: 2967295 - 2969985 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp000436795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.