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Cluster: B89.bin_3_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B89_contig_1526 B89_contig_1526_2384 2804214 2807324 + 1.B.14.6.1
pfam B89_contig_1526 B89_contig_1526_2385 2807352 2809031 + SusD_RagB | SusD-like_3
CAZyme B89_contig_1526 B89_contig_1526_2386 2809036 2809872 + GH16_3
CAZyme B89_contig_1526 B89_contig_1526_2387 2809882 2812131 + GH3
TF B89_contig_1526 B89_contig_1526_2388 2812169 2812876 - LytTR
TC B89_contig_1526 B89_contig_1526_2389 2812873 2813904 - 9.B.33.1.1
pfam B89_contig_1526 B89_contig_1526_2390 2814099 2816864 + CarboxypepD_reg | CarbopepD_reg_2 | OMP_b-brl_3 | SpaA
NULL(UNKNOWN) B89_contig_1526 B89_contig_1526_2391 2816882 2817193 + NULL(UNKNOWN)
[View Structural Homologs]
TC B89_contig_1526 B89_contig_1526_2392 2817504 2818874 - 2.A.66.1.33
Gene ID: B89_contig_1526_2384
Type: TC
Location: 2804214 - 2807324 (+)
Gene ID: B89_contig_1526_2385
Type: pfam
Location: 2807352 - 2809031 (+)
Gene ID: B89_contig_1526_2386
Type: CAZyme
Location: 2809036 - 2809872 (+)
Gene ID: B89_contig_1526_2387
Type: CAZyme
Location: 2809882 - 2812131 (+)
Gene ID: B89_contig_1526_2388
Type: TF
Location: 2812169 - 2812876 (-)
Gene ID: B89_contig_1526_2389
Type: TC
Location: 2812873 - 2813904 (-)
Gene ID: B89_contig_1526_2390
Type: pfam
Location: 2814099 - 2816864 (+)
Gene ID: B89_contig_1526_2391
Type:
Location: 2816882 - 2817193 (+)
Gene ID: B89_contig_1526_2392
Type: TC
Location: 2817504 - 2818874 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B89_contig_1526_2391 vegetarian > omnivore 1.52886 0.03453

🧭 Explore Read Mapping of CGC

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