Cluster: B89.bin_3_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B89.bin_3
- CGC Family ID: CGCFAM_00700
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B89_contig_1526 | B89_contig_1526_46 | 36480 | 37691 | + | 2.A.1.7.2 |
| pfam | B89_contig_1526 | B89_contig_1526_47 | 37805 | 38533 | - | Radical_SAM | Fer4_12 |
| pfam | B89_contig_1526 | B89_contig_1526_48 | 38629 | 40845 | - | Gly_radical | PFL-like |
| CAZyme | B89_contig_1526 | B89_contig_1526_49 | 42438 | 44066 | + | GH37 |
Gene ID: B89_contig_1526_46
Type: TC
Location: 36480 - 37691 (+)
Type: TC
Location: 36480 - 37691 (+)
Gene ID: B89_contig_1526_47
Type: pfam
Location: 37805 - 38533 (-)
Type: pfam
Location: 37805 - 38533 (-)
Gene ID: B89_contig_1526_48
Type: pfam
Location: 38629 - 40845 (-)
Type: pfam
Location: 38629 - 40845 (-)
Gene ID: B89_contig_1526_49
Type: CAZyme
Location: 42438 - 44066 (+)
Type: CAZyme
Location: 42438 - 44066 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp000436795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.