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Cluster: B89.bin_3_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B89_contig_1526 B89_contig_1526_2218 2575575 2577374 + GH110
pfam B89_contig_1526 B89_contig_1526_2219 2577391 2578470 + DUF5009
CAZyme B89_contig_1526 B89_contig_1526_2220 2578484 2578903 + GT6
NULL(UNKNOWN) B89_contig_1526 B89_contig_1526_2221 2579103 2579222 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme B89_contig_1526 B89_contig_1526_2222 2579251 2580912 + GH109
CAZyme B89_contig_1526 B89_contig_1526_2223 2580916 2583402 + GH95
pfam B89_contig_1526 B89_contig_1526_2224 2584136 2585503 - FtsX | MacB_PCD
TC B89_contig_1526 B89_contig_1526_2225 2585590 2586267 - 3.A.1.122.14
Gene ID: B89_contig_1526_2218
Type: CAZyme
Location: 2575575 - 2577374 (+)
Gene ID: B89_contig_1526_2219
Type: pfam
Location: 2577391 - 2578470 (+)
Gene ID: B89_contig_1526_2220
Type: CAZyme
Location: 2578484 - 2578903 (+)
Gene ID: B89_contig_1526_2221
Type:
Location: 2579103 - 2579222 (+)
Gene ID: B89_contig_1526_2222
Type: CAZyme
Location: 2579251 - 2580912 (+)
Gene ID: B89_contig_1526_2223
Type: CAZyme
Location: 2580916 - 2583402 (+)
Gene ID: B89_contig_1526_2224
Type: pfam
Location: 2584136 - 2585503 (-)
Gene ID: B89_contig_1526_2225
Type: TC
Location: 2585590 - 2586267 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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