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Cluster: B89.bin_3_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B89_contig_1526 B89_contig_1526_1797 2014460 2016301 - 1.B.14.6.13
pfam B89_contig_1526 B89_contig_1526_1798 2016568 2017854 - DDE_Tnp_1 | DDE_Tnp_1_4
TC B89_contig_1526 B89_contig_1526_1799 2017985 2018779 - 1.B.14.6.13
STP B89_contig_1526 B89_contig_1526_1800 2018969 2019541 + Sigma70_r2 | Sigma70_r4_2
NULL(UNKNOWN) B89_contig_1526 B89_contig_1526_1801 2019622 2019906 + NULL(UNKNOWN)
[View Structural Homologs]
TC B89_contig_1526 B89_contig_1526_1802 2020122 2023457 + 1.B.14.6.13
TC B89_contig_1526 B89_contig_1526_1803 2023475 2025097 + 8.A.46.2.2
CAZyme B89_contig_1526 B89_contig_1526_1804 2025128 2026225 + GH18
pfam B89_contig_1526 B89_contig_1526_1805 2026250 2027413 + BT_3987-like_N | Laminin_G_3
NULL(UNKNOWN) B89_contig_1526 B89_contig_1526_1806 2027311 2027616 - NULL(UNKNOWN)
[View Structural Homologs]
TC B89_contig_1526 B89_contig_1526_1807 2028028 2030655 + 3.A.3.2.39
pfam B89_contig_1526 B89_contig_1526_1808 2030683 2031297 + Hydrolase | HAD_2
pfam B89_contig_1526 B89_contig_1526_1809 2031306 2032244 + Flavokinase | FAD_syn
CAZyme B89_contig_1526 B89_contig_1526_1810 2032314 2034422 - GH97
pfam B89_contig_1526 B89_contig_1526_1811 2034735 2035145 + DUF3836
TC B89_contig_1526 B89_contig_1526_1812 2035162 2035977 + 9.B.2.1.5
Gene ID: B89_contig_1526_1797
Type: TC
Location: 2014460 - 2016301 (-)
Gene ID: B89_contig_1526_1798
Type: pfam
Location: 2016568 - 2017854 (-)
Gene ID: B89_contig_1526_1799
Type: TC
Location: 2017985 - 2018779 (-)
Gene ID: B89_contig_1526_1800
Type: STP
Location: 2018969 - 2019541 (+)
Gene ID: B89_contig_1526_1801
Type:
Location: 2019622 - 2019906 (+)
Gene ID: B89_contig_1526_1802
Type: TC
Location: 2020122 - 2023457 (+)
Gene ID: B89_contig_1526_1803
Type: TC
Location: 2023475 - 2025097 (+)
Gene ID: B89_contig_1526_1804
Type: CAZyme
Location: 2025128 - 2026225 (+)
Gene ID: B89_contig_1526_1805
Type: pfam
Location: 2026250 - 2027413 (+)
Gene ID: B89_contig_1526_1806
Type:
Location: 2027311 - 2027616 (-)
Gene ID: B89_contig_1526_1807
Type: TC
Location: 2028028 - 2030655 (+)
Gene ID: B89_contig_1526_1808
Type: pfam
Location: 2030683 - 2031297 (+)
Gene ID: B89_contig_1526_1809
Type: pfam
Location: 2031306 - 2032244 (+)
Gene ID: B89_contig_1526_1810
Type: CAZyme
Location: 2032314 - 2034422 (-)
Gene ID: B89_contig_1526_1811
Type: pfam
Location: 2034735 - 2035145 (+)
Gene ID: B89_contig_1526_1812
Type: TC
Location: 2035162 - 2035977 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B89_contig_1526_1805 vegetarian > omnivore 1.42871 0.03453
B89_contig_1526_1809 vegetarian > omnivore 1.01789 0.03326

🧭 Explore Read Mapping of CGC

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