Cluster: B89.bin_3_CGC27
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate: fructan
- Genome ID: B89.bin_3
- CGC Family ID: CGCFAM_00017
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B89_contig_1526 | B89_contig_1526_1501 | 1681856 | 1683025 | - | 2.A.1.7.17 |
| CAZyme | B89_contig_1526 | B89_contig_1526_1502 | 1683056 | 1685245 | - | GH36 |
| CAZyme | B89_contig_1526 | B89_contig_1526_1503 | 1685366 | 1687243 | - | GH32 |
| NULL(UNKNOWN) | B89_contig_1526 | B89_contig_1526_1504 | 1687424 | 1689031 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | B89_contig_1526 | B89_contig_1526_1505 | 1689009 | 1689836 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B89_contig_1526 | B89_contig_1526_1506 | 1690112 | 1691923 | - | GH32 |
| CAZyme | B89_contig_1526 | B89_contig_1526_1507 | 1691943 | 1693517 | - | GH32 |
| pfam | B89_contig_1526 | B89_contig_1526_1508 | 1693583 | 1694986 | - | DUF4960 |
| pfam | B89_contig_1526 | B89_contig_1526_1509 | 1695017 | 1696750 | - | SusD_RagB | SusD-like_3 |
| TC | B89_contig_1526 | B89_contig_1526_1510 | 1696777 | 1699884 | - | 1.B.14.6.1 |
| pfam | B89_contig_1526 | B89_contig_1526_1511 | 1700077 | 1700904 | - | LGT |
| CAZyme | B89_contig_1526 | B89_contig_1526_1512 | 1701090 | 1702139 | - | GH43_24 |
| CAZyme | B89_contig_1526 | B89_contig_1526_1513 | 1702160 | 1703671 | - | GH136 |
| pfam | B89_contig_1526 | B89_contig_1526_1514 | 1703740 | 1705386 | - | SusD-like_3 |
| TC | B89_contig_1526 | B89_contig_1526_1515 | 1705418 | 1708429 | - | 1.B.14.6.1 |
Gene ID: B89_contig_1526_1501
Type: TC
Location: 1681856 - 1683025 (-)
Type: TC
Location: 1681856 - 1683025 (-)
Gene ID: B89_contig_1526_1502
Type: CAZyme
Location: 1683056 - 1685245 (-)
Type: CAZyme
Location: 1683056 - 1685245 (-)
Gene ID: B89_contig_1526_1503
Type: CAZyme
Location: 1685366 - 1687243 (-)
Type: CAZyme
Location: 1685366 - 1687243 (-)
Gene ID: B89_contig_1526_1504
Type:
Location: 1687424 - 1689031 (-)
Type:
Location: 1687424 - 1689031 (-)
Gene ID: B89_contig_1526_1505
Type:
Location: 1689009 - 1689836 (-)
Type:
Location: 1689009 - 1689836 (-)
Gene ID: B89_contig_1526_1506
Type: CAZyme
Location: 1690112 - 1691923 (-)
Type: CAZyme
Location: 1690112 - 1691923 (-)
Gene ID: B89_contig_1526_1507
Type: CAZyme
Location: 1691943 - 1693517 (-)
Type: CAZyme
Location: 1691943 - 1693517 (-)
Gene ID: B89_contig_1526_1508
Type: pfam
Location: 1693583 - 1694986 (-)
Type: pfam
Location: 1693583 - 1694986 (-)
Gene ID: B89_contig_1526_1509
Type: pfam
Location: 1695017 - 1696750 (-)
Type: pfam
Location: 1695017 - 1696750 (-)
Gene ID: B89_contig_1526_1510
Type: TC
Location: 1696777 - 1699884 (-)
Type: TC
Location: 1696777 - 1699884 (-)
Gene ID: B89_contig_1526_1511
Type: pfam
Location: 1700077 - 1700904 (-)
Type: pfam
Location: 1700077 - 1700904 (-)
Gene ID: B89_contig_1526_1512
Type: CAZyme
Location: 1701090 - 1702139 (-)
Type: CAZyme
Location: 1701090 - 1702139 (-)
Gene ID: B89_contig_1526_1513
Type: CAZyme
Location: 1702160 - 1703671 (-)
Type: CAZyme
Location: 1702160 - 1703671 (-)
Gene ID: B89_contig_1526_1514
Type: pfam
Location: 1703740 - 1705386 (-)
Type: pfam
Location: 1703740 - 1705386 (-)
Gene ID: B89_contig_1526_1515
Type: TC
Location: 1705418 - 1708429 (-)
Type: TC
Location: 1705418 - 1708429 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp000436795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B89_contig_1526_1502 | vegetarian > vegan | 1.56652 | 0.03476 |