Cluster: B89.bin_3_CGC21
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: B89.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B89_contig_1526 | B89_contig_1526_1258 | 1369404 | 1370885 | - | 1.B.14.6.1 |
| pfam | B89_contig_1526 | B89_contig_1526_1259 | 1370962 | 1371942 | - | HTH_38 |
| TC | B89_contig_1526 | B89_contig_1526_1260 | 1372088 | 1373809 | - | 1.B.14.6.1 |
| CAZyme | B89_contig_1526 | B89_contig_1526_1261 | 1373961 | 1376285 | + | GH20 |
| CAZyme | B89_contig_1526 | B89_contig_1526_1262 | 1376464 | 1377918 | - | GH30_2 |
| CAZyme | B89_contig_1526 | B89_contig_1526_1263 | 1378056 | 1379252 | - | CE1 |
| NULL(UNKNOWN) | B89_contig_1526 | B89_contig_1526_1264 | 1379376 | 1381646 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B89_contig_1526 | B89_contig_1526_1265 | 1381684 | 1384023 | - | GH3 |
Gene ID: B89_contig_1526_1258
Type: TC
Location: 1369404 - 1370885 (-)
Type: TC
Location: 1369404 - 1370885 (-)
Gene ID: B89_contig_1526_1259
Type: pfam
Location: 1370962 - 1371942 (-)
Type: pfam
Location: 1370962 - 1371942 (-)
Gene ID: B89_contig_1526_1260
Type: TC
Location: 1372088 - 1373809 (-)
Type: TC
Location: 1372088 - 1373809 (-)
Gene ID: B89_contig_1526_1261
Type: CAZyme
Location: 1373961 - 1376285 (+)
Type: CAZyme
Location: 1373961 - 1376285 (+)
Gene ID: B89_contig_1526_1262
Type: CAZyme
Location: 1376464 - 1377918 (-)
Type: CAZyme
Location: 1376464 - 1377918 (-)
Gene ID: B89_contig_1526_1263
Type: CAZyme
Location: 1378056 - 1379252 (-)
Type: CAZyme
Location: 1378056 - 1379252 (-)
Gene ID: B89_contig_1526_1264
Type:
Location: 1379376 - 1381646 (-)
Type:
Location: 1379376 - 1381646 (-)
Gene ID: B89_contig_1526_1265
Type: CAZyme
Location: 1381684 - 1384023 (-)
Type: CAZyme
Location: 1381684 - 1384023 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp000436795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B89_contig_1526_1259 | vegetarian > omnivore | 1.46387 | 0.00932 |