Cluster: B89.bin_3_CGC15
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: B89.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B89_contig_1526 | B89_contig_1526_687 | 730912 | 734313 | - | 1.B.14.6.1 |
| pfam | B89_contig_1526 | B89_contig_1526_688 | 734470 | 736071 | - | Apiosidase | DUF5060 | DUF5605 |
| NULL(UNKNOWN) | B89_contig_1526 | B89_contig_1526_689 | 736196 | 736381 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B89_contig_1526 | B89_contig_1526_690 | 736300 | 737466 | - | GH105 |
| pfam | B89_contig_1526 | B89_contig_1526_691 | 737521 | 738927 | - | Sde182_NH-like | Sde0182_C |
| CAZyme | B89_contig_1526 | B89_contig_1526_692 | 738924 | 740327 | - | PL1_2 |
| pfam | B89_contig_1526 | B89_contig_1526_693 | 740369 | 741817 | - | Sde182_NH-like | Sde0182_C |
| sulfatase | B89_contig_1526 | B89_contig_1526_694 | 741850 | 743130 | - | S1_16 |
| CAZyme | B89_contig_1526 | B89_contig_1526_695 | 743171 | 744259 | - | PL10_1 |
Gene ID: B89_contig_1526_687
Type: TC
Location: 730912 - 734313 (-)
Type: TC
Location: 730912 - 734313 (-)
Gene ID: B89_contig_1526_688
Type: pfam
Location: 734470 - 736071 (-)
Type: pfam
Location: 734470 - 736071 (-)
Gene ID: B89_contig_1526_689
Type:
Location: 736196 - 736381 (+)
Type:
Location: 736196 - 736381 (+)
Gene ID: B89_contig_1526_690
Type: CAZyme
Location: 736300 - 737466 (-)
Type: CAZyme
Location: 736300 - 737466 (-)
Gene ID: B89_contig_1526_691
Type: pfam
Location: 737521 - 738927 (-)
Type: pfam
Location: 737521 - 738927 (-)
Gene ID: B89_contig_1526_692
Type: CAZyme
Location: 738924 - 740327 (-)
Type: CAZyme
Location: 738924 - 740327 (-)
Gene ID: B89_contig_1526_693
Type: pfam
Location: 740369 - 741817 (-)
Type: pfam
Location: 740369 - 741817 (-)
Gene ID: B89_contig_1526_694
Type: sulfatase
Location: 741850 - 743130 (-)
Type: sulfatase
Location: 741850 - 743130 (-)
Gene ID: B89_contig_1526_695
Type: CAZyme
Location: 743171 - 744259 (-)
Type: CAZyme
Location: 743171 - 744259 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp000436795
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B89_contig_1526_690 | vegetarian > vegan | 2.12980 | 0.03476 |
| B89_contig_1526_691 | vegetarian > vegan | 2.02043 | 0.03476 |
| B89_contig_1526_693 | vegetarian > vegan | 1.98370 | 0.03476 |
| B89_contig_1526_694 | vegetarian > vegan | 1.63264 | 0.03476 |
| B89_contig_1526_695 | vegetarian > vegan | 1.55218 | 0.03476 |