Cluster: B74.bin_12_CGC3
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 17
- Substrate: xylan
- Genome ID: B74.bin_12
- CGC Family ID: CGCFAM_00273
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B74_contig_2394 | B74_contig_2394_133 | 189434 | 192289 | - | GH2 |
| CAZyme | B74_contig_2394 | B74_contig_2394_134 | 192459 | 194579 | - | GH43_35 |
| CAZyme | B74_contig_2394 | B74_contig_2394_135 | 194614 | 196500 | - | CE20 | CE20 |
| CAZyme | B74_contig_2394 | B74_contig_2394_136 | 196551 | 199151 | - | GH115 |
| CAZyme | B74_contig_2394 | B74_contig_2394_137 | 199177 | 201801 | - | GH2 |
| CAZyme | B74_contig_2394 | B74_contig_2394_138 | 202107 | 204539 | - | GH95 |
| CAZyme | B74_contig_2394 | B74_contig_2394_139 | 204589 | 205425 | - | CE1 |
| CAZyme | B74_contig_2394 | B74_contig_2394_140 | 205440 | 206300 | - | CE6 |
| CAZyme | B74_contig_2394 | B74_contig_2394_141 | 206305 | 207936 | - | CBM91 | GH43_10 |
| CAZyme | B74_contig_2394 | B74_contig_2394_142 | 207949 | 209592 | - | CBM6 | GH43_29 |
| CAZyme | B74_contig_2394 | B74_contig_2394_143 | 209649 | 211010 | - | CBM6 | GH43_29 |
| CAZyme | B74_contig_2394 | B74_contig_2394_144 | 211044 | 212132 | - | GH43_29 |
| CAZyme | B74_contig_2394 | B74_contig_2394_145 | 212149 | 213318 | - | CE1 |
| CAZyme | B74_contig_2394 | B74_contig_2394_146 | 213381 | 217049 | - | CBM91 | GH43_10 | GH5_21 |
| TF | B74_contig_2394 | B74_contig_2394_147 | 217299 | 221363 | - | HTH_AraC | HTH_AraC |
| CAZyme | B74_contig_2394 | B74_contig_2394_148 | 222127 | 224190 | - | GH67 |
| CAZyme | B74_contig_2394 | B74_contig_2394_149 | 224199 | 225167 | - | GH43_1 |
| CAZyme | B74_contig_2394 | B74_contig_2394_150 | 225211 | 226335 | - | GH10 |
| TC | B74_contig_2394 | B74_contig_2394_151 | 226377 | 227903 | - | 2.A.2.3.4 |
Gene ID: B74_contig_2394_133
Type: CAZyme
Location: 189434 - 192289 (-)
Type: CAZyme
Location: 189434 - 192289 (-)
Gene ID: B74_contig_2394_134
Type: CAZyme
Location: 192459 - 194579 (-)
Type: CAZyme
Location: 192459 - 194579 (-)
Gene ID: B74_contig_2394_135
Type: CAZyme
Location: 194614 - 196500 (-)
Type: CAZyme
Location: 194614 - 196500 (-)
Gene ID: B74_contig_2394_136
Type: CAZyme
Location: 196551 - 199151 (-)
Type: CAZyme
Location: 196551 - 199151 (-)
Gene ID: B74_contig_2394_137
Type: CAZyme
Location: 199177 - 201801 (-)
Type: CAZyme
Location: 199177 - 201801 (-)
Gene ID: B74_contig_2394_138
Type: CAZyme
Location: 202107 - 204539 (-)
Type: CAZyme
Location: 202107 - 204539 (-)
Gene ID: B74_contig_2394_139
Type: CAZyme
Location: 204589 - 205425 (-)
Type: CAZyme
Location: 204589 - 205425 (-)
Gene ID: B74_contig_2394_140
Type: CAZyme
Location: 205440 - 206300 (-)
Type: CAZyme
Location: 205440 - 206300 (-)
Gene ID: B74_contig_2394_141
Type: CAZyme
Location: 206305 - 207936 (-)
Type: CAZyme
Location: 206305 - 207936 (-)
Gene ID: B74_contig_2394_142
Type: CAZyme
Location: 207949 - 209592 (-)
Type: CAZyme
Location: 207949 - 209592 (-)
Gene ID: B74_contig_2394_143
Type: CAZyme
Location: 209649 - 211010 (-)
Type: CAZyme
Location: 209649 - 211010 (-)
Gene ID: B74_contig_2394_144
Type: CAZyme
Location: 211044 - 212132 (-)
Type: CAZyme
Location: 211044 - 212132 (-)
Gene ID: B74_contig_2394_145
Type: CAZyme
Location: 212149 - 213318 (-)
Type: CAZyme
Location: 212149 - 213318 (-)
Gene ID: B74_contig_2394_146
Type: CAZyme
Location: 213381 - 217049 (-)
Type: CAZyme
Location: 213381 - 217049 (-)
Gene ID: B74_contig_2394_147
Type: TF
Location: 217299 - 221363 (-)
Type: TF
Location: 217299 - 221363 (-)
Gene ID: B74_contig_2394_148
Type: CAZyme
Location: 222127 - 224190 (-)
Type: CAZyme
Location: 222127 - 224190 (-)
Gene ID: B74_contig_2394_149
Type: CAZyme
Location: 224199 - 225167 (-)
Type: CAZyme
Location: 224199 - 225167 (-)
Gene ID: B74_contig_2394_150
Type: CAZyme
Location: 225211 - 226335 (-)
Type: CAZyme
Location: 225211 - 226335 (-)
Gene ID: B74_contig_2394_151
Type: TC
Location: 226377 - 227903 (-)
Type: TC
Location: 226377 - 227903 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella sp944321525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.