Cluster: B64.bin_2_CGC8
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: B64.bin_2
- CGC Family ID: CGCFAM_00317
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B64_contig_1965 | B64_contig_1965_521 | 611752 | 612441 | - | 3.A.2.1.5 |
| NULL(UNKNOWN) | B64_contig_1965 | B64_contig_1965_522 | 612613 | 612954 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B64_contig_1965 | B64_contig_1965_523 | 612988 | 613926 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | B64_contig_1965 | B64_contig_1965_524 | 613923 | 615059 | - | GT4 |
| CAZyme | B64_contig_1965 | B64_contig_1965_525 | 615059 | 616204 | - | GT4 |
| pfam | B64_contig_1965 | B64_contig_1965_526 | 616292 | 617329 | - | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| pfam | B64_contig_1965 | B64_contig_1965_527 | 617412 | 618476 | - | NTP_transferase | NTP_transf_3 | ManC_GMP_beta-helix |
| TC | B64_contig_1965 | B64_contig_1965_528 | 618473 | 619861 | - | 9.B.18.1.3 |
| NULL(UNKNOWN) | B64_contig_1965 | B64_contig_1965_529 | 620178 | 620714 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | B64_contig_1965 | B64_contig_1965_530 | 620931 | 622160 | + | S55.001 |
| TC | B64_contig_1965 | B64_contig_1965_531 | 622286 | 622558 | - | 8.A.8.1.4 |
Gene ID: B64_contig_1965_521
Type: TC
Location: 611752 - 612441 (-)
Type: TC
Location: 611752 - 612441 (-)
Gene ID: B64_contig_1965_522
Type:
Location: 612613 - 612954 (-)
Type:
Location: 612613 - 612954 (-)
Gene ID: B64_contig_1965_523
Type: pfam
Location: 612988 - 613926 (-)
Type: pfam
Location: 612988 - 613926 (-)
Gene ID: B64_contig_1965_524
Type: CAZyme
Location: 613923 - 615059 (-)
Type: CAZyme
Location: 613923 - 615059 (-)
Gene ID: B64_contig_1965_525
Type: CAZyme
Location: 615059 - 616204 (-)
Type: CAZyme
Location: 615059 - 616204 (-)
Gene ID: B64_contig_1965_526
Type: pfam
Location: 616292 - 617329 (-)
Type: pfam
Location: 616292 - 617329 (-)
Gene ID: B64_contig_1965_527
Type: pfam
Location: 617412 - 618476 (-)
Type: pfam
Location: 617412 - 618476 (-)
Gene ID: B64_contig_1965_528
Type: TC
Location: 618473 - 619861 (-)
Type: TC
Location: 618473 - 619861 (-)
Gene ID: B64_contig_1965_529
Type:
Location: 620178 - 620714 (-)
Type:
Location: 620178 - 620714 (-)
Gene ID: B64_contig_1965_530
Type: peptidase
Location: 620931 - 622160 (+)
Type: peptidase
Location: 620931 - 622160 (+)
Gene ID: B64_contig_1965_531
Type: TC
Location: 622286 - 622558 (-)
Type: TC
Location: 622286 - 622558 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900540005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.