Cluster: B64.bin_2_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B64.bin_2
- CGC Family ID: CGCFAM_04367
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B64_contig_1965 | B64_contig_1965_1172 | 1334263 | 1335102 | + | CE4 |
| pfam | B64_contig_1965 | B64_contig_1965_1173 | 1335365 | 1336750 | - | DUF4340 | DUF4340 |
| pfam | B64_contig_1965 | B64_contig_1965_1174 | 1336750 | 1338243 | - | ABC_transp_aux | IFT52_GIFT |
| TC | B64_contig_1965 | B64_contig_1965_1175 | 1338249 | 1338983 | - | 3.A.1.132.1 |
| TC | B64_contig_1965 | B64_contig_1965_1176 | 1338986 | 1340026 | - | 3.A.1.132.9 |
| CAZyme | B64_contig_1965 | B64_contig_1965_1177 | 1340575 | 1343133 | + | GH48 |
Gene ID: B64_contig_1965_1172
Type: CAZyme
Location: 1334263 - 1335102 (+)
Type: CAZyme
Location: 1334263 - 1335102 (+)
Gene ID: B64_contig_1965_1173
Type: pfam
Location: 1335365 - 1336750 (-)
Type: pfam
Location: 1335365 - 1336750 (-)
Gene ID: B64_contig_1965_1174
Type: pfam
Location: 1336750 - 1338243 (-)
Type: pfam
Location: 1336750 - 1338243 (-)
Gene ID: B64_contig_1965_1175
Type: TC
Location: 1338249 - 1338983 (-)
Type: TC
Location: 1338249 - 1338983 (-)
Gene ID: B64_contig_1965_1176
Type: TC
Location: 1338986 - 1340026 (-)
Type: TC
Location: 1338986 - 1340026 (-)
Gene ID: B64_contig_1965_1177
Type: CAZyme
Location: 1340575 - 1343133 (+)
Type: CAZyme
Location: 1340575 - 1343133 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900540005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.