Cluster: B64.bin_2_CGC12
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: B64.bin_2
- CGC Family ID: CGCFAM_00281
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B64_contig_1965 | B64_contig_1965_754 | 896694 | 899726 | - | CBM35 | PL11_1 |
| NULL(UNKNOWN) | B64_contig_1965 | B64_contig_1965_755 | 901752 | 902006 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B64_contig_1965 | B64_contig_1965_756 | 905853 | 906629 | + | 3.A.1.103.4 |
| TC | B64_contig_1965 | B64_contig_1965_757 | 906629 | 907945 | + | 3.A.1.103.4 |
| pfam | B64_contig_1965 | B64_contig_1965_758 | 907966 | 909120 | + | MetW | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 |
| NULL(UNKNOWN) | B64_contig_1965 | B64_contig_1965_759 | 909131 | 909616 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B64_contig_1965 | B64_contig_1965_760 | 909613 | 910689 | + | GT4 |
| CAZyme | B64_contig_1965 | B64_contig_1965_761 | 910715 | 911923 | + | GT4 |
| CAZyme | B64_contig_1965 | B64_contig_1965_762 | 911920 | 913110 | + | GT4 |
| NULL(UNKNOWN) | B64_contig_1965 | B64_contig_1965_763 | 913119 | 915623 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B64_contig_1965 | B64_contig_1965_764 | 915640 | 916608 | + | GT2 |
| TC | B64_contig_1965 | B64_contig_1965_765 | 916654 | 917556 | + | 9.B.102.7.10 |
Gene ID: B64_contig_1965_754
Type: CAZyme
Location: 896694 - 899726 (-)
Type: CAZyme
Location: 896694 - 899726 (-)
Gene ID: B64_contig_1965_755
Type:
Location: 901752 - 902006 (+)
Type:
Location: 901752 - 902006 (+)
Gene ID: B64_contig_1965_756
Type: TC
Location: 905853 - 906629 (+)
Type: TC
Location: 905853 - 906629 (+)
Gene ID: B64_contig_1965_757
Type: TC
Location: 906629 - 907945 (+)
Type: TC
Location: 906629 - 907945 (+)
Gene ID: B64_contig_1965_758
Type: pfam
Location: 907966 - 909120 (+)
Type: pfam
Location: 907966 - 909120 (+)
Gene ID: B64_contig_1965_759
Type:
Location: 909131 - 909616 (+)
Type:
Location: 909131 - 909616 (+)
Gene ID: B64_contig_1965_760
Type: CAZyme
Location: 909613 - 910689 (+)
Type: CAZyme
Location: 909613 - 910689 (+)
Gene ID: B64_contig_1965_761
Type: CAZyme
Location: 910715 - 911923 (+)
Type: CAZyme
Location: 910715 - 911923 (+)
Gene ID: B64_contig_1965_762
Type: CAZyme
Location: 911920 - 913110 (+)
Type: CAZyme
Location: 911920 - 913110 (+)
Gene ID: B64_contig_1965_763
Type:
Location: 913119 - 915623 (+)
Type:
Location: 913119 - 915623 (+)
Gene ID: B64_contig_1965_764
Type: CAZyme
Location: 915640 - 916608 (+)
Type: CAZyme
Location: 915640 - 916608 (+)
Gene ID: B64_contig_1965_765
Type: TC
Location: 916654 - 917556 (+)
Type: TC
Location: 916654 - 917556 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Species
Ruminococcus sp900540005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.