Cluster: B57.bin_8_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: B57.bin_8
- CGC Family ID: CGCFAM_07530
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B57_contig_4524 | B57_contig_4524_227 | 209453 | 210715 | - | 2.A.37.2.2 |
| CAZyme | B57_contig_4524 | B57_contig_4524_228 | 211191 | 212426 | + | GH5_10 |
| CAZyme | B57_contig_4524 | B57_contig_4524_229 | 212880 | 215825 | + | GH5_4 |
| NULL(UNKNOWN) | B57_contig_4524 | B57_contig_4524_230 | 215988 | 216155 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B57_contig_4524 | B57_contig_4524_231 | 216155 | 217381 | - | 3.A.3.6.16 |
| pfam | B57_contig_4524 | B57_contig_4524_232 | 217542 | 217817 | - | Trns_repr_metal |
| TC | B57_contig_4524 | B57_contig_4524_233 | 217928 | 219919 | - | 8.A.59.4.1 |
Gene ID: B57_contig_4524_227
Type: TC
Location: 209453 - 210715 (-)
Type: TC
Location: 209453 - 210715 (-)
Gene ID: B57_contig_4524_228
Type: CAZyme
Location: 211191 - 212426 (+)
Type: CAZyme
Location: 211191 - 212426 (+)
Gene ID: B57_contig_4524_229
Type: CAZyme
Location: 212880 - 215825 (+)
Type: CAZyme
Location: 212880 - 215825 (+)
Gene ID: B57_contig_4524_230
Type:
Location: 215988 - 216155 (-)
Type:
Location: 215988 - 216155 (-)
Gene ID: B57_contig_4524_231
Type: TC
Location: 216155 - 217381 (-)
Type: TC
Location: 216155 - 217381 (-)
Gene ID: B57_contig_4524_232
Type: pfam
Location: 217542 - 217817 (-)
Type: pfam
Location: 217542 - 217817 (-)
Gene ID: B57_contig_4524_233
Type: TC
Location: 217928 - 219919 (-)
Type: TC
Location: 217928 - 219919 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp019423705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.