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Cluster: B57.bin_8_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B57_contig_872 B57_contig_872_1775 1944997 1945689 - 3.A.1.4.4
TC B57_contig_872 B57_contig_872_1776 1945692 1946477 - 3.A.1.4.5
TC B57_contig_872 B57_contig_872_1777 1946479 1947618 - 3.A.1.4.4
TC B57_contig_872 B57_contig_872_1778 1947635 1948540 - 3.A.1.4.5
TC B57_contig_872 B57_contig_872_1779 1948656 1949897 - 3.A.1.4.5
TC B57_contig_872 B57_contig_872_1780 1950049 1950741 - 2.A.115.2.14
TF B57_contig_872 B57_contig_872_1781 1950838 1951605 - HTH_AraC | HTH_AraC
STP B57_contig_872 B57_contig_872_1782 1951602 1954310 - HATPase_c | HisKA | Response_reg
TC B57_contig_872 B57_contig_872_1783 1954449 1957538 - 9.B.34.1.2
pfam B57_contig_872 B57_contig_872_1784 1957579 1958955 - SBP_bac_8
TC B57_contig_872 B57_contig_872_1785 1959255 1959878 - 1.A.16.5.1
CAZyme B57_contig_872 B57_contig_872_1786 1960328 1964068 - CBM23 | CBM65 | CBM65 | GH5_7
NULL(UNKNOWN) B57_contig_872 B57_contig_872_1787 1964538 1964741 - NULL(UNKNOWN)
[View Structural Homologs]
TC B57_contig_872 B57_contig_872_1788 1964746 1966737 - 3.A.1.134.9
TC B57_contig_872 B57_contig_872_1789 1966730 1967497 - 3.A.1.134.4
Gene ID: B57_contig_872_1775
Type: TC
Location: 1944997 - 1945689 (-)
Gene ID: B57_contig_872_1776
Type: TC
Location: 1945692 - 1946477 (-)
Gene ID: B57_contig_872_1777
Type: TC
Location: 1946479 - 1947618 (-)
Gene ID: B57_contig_872_1778
Type: TC
Location: 1947635 - 1948540 (-)
Gene ID: B57_contig_872_1779
Type: TC
Location: 1948656 - 1949897 (-)
Gene ID: B57_contig_872_1780
Type: TC
Location: 1950049 - 1950741 (-)
Gene ID: B57_contig_872_1781
Type: TF
Location: 1950838 - 1951605 (-)
Gene ID: B57_contig_872_1782
Type: STP
Location: 1951602 - 1954310 (-)
Gene ID: B57_contig_872_1783
Type: TC
Location: 1954449 - 1957538 (-)
Gene ID: B57_contig_872_1784
Type: pfam
Location: 1957579 - 1958955 (-)
Gene ID: B57_contig_872_1785
Type: TC
Location: 1959255 - 1959878 (-)
Gene ID: B57_contig_872_1786
Type: CAZyme
Location: 1960328 - 1964068 (-)
Gene ID: B57_contig_872_1787
Type:
Location: 1964538 - 1964741 (-)
Gene ID: B57_contig_872_1788
Type: TC
Location: 1964746 - 1966737 (-)
Gene ID: B57_contig_872_1789
Type: TC
Location: 1966730 - 1967497 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B57_contig_872_1780 vegan > omnivore 4.51436 0.03904

🧭 Explore Read Mapping of CGC

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