Cluster: B57.bin_8_CGC23
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 5
- Substrate:
- Genome ID: B57.bin_8
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B57_contig_872 | B57_contig_872_1708 | 1862364 | 1863695 | - | 2.A.66.1.33 |
| CAZyme | B57_contig_872 | B57_contig_872_1709 | 1863715 | 1866429 | - | GH59 |
| TF | B57_contig_872 | B57_contig_872_1710 | 1866555 | 1867376 | - | HTH_AraC | HTH_AraC |
| pfam | B57_contig_872 | B57_contig_872_1711 | 1867555 | 1870782 | + | Resolvase | Resolvase | Recombinase | Recombinase | Zn_ribbon_recom |
| CAZyme | B57_contig_872 | B57_contig_872_1712 | 1870929 | 1872020 | + | GT4 |
| CAZyme | B57_contig_872 | B57_contig_872_1713 | 1872637 | 1873404 | + | GT26 |
| CAZyme | B57_contig_872 | B57_contig_872_1714 | 1873409 | 1874593 | + | GT4 |
| CAZyme | B57_contig_872 | B57_contig_872_1715 | 1874607 | 1875389 | + | GT2 |
Gene ID: B57_contig_872_1708
Type: TC
Location: 1862364 - 1863695 (-)
Type: TC
Location: 1862364 - 1863695 (-)
Gene ID: B57_contig_872_1709
Type: CAZyme
Location: 1863715 - 1866429 (-)
Type: CAZyme
Location: 1863715 - 1866429 (-)
Gene ID: B57_contig_872_1710
Type: TF
Location: 1866555 - 1867376 (-)
Type: TF
Location: 1866555 - 1867376 (-)
Gene ID: B57_contig_872_1711
Type: pfam
Location: 1867555 - 1870782 (+)
Type: pfam
Location: 1867555 - 1870782 (+)
Gene ID: B57_contig_872_1712
Type: CAZyme
Location: 1870929 - 1872020 (+)
Type: CAZyme
Location: 1870929 - 1872020 (+)
Gene ID: B57_contig_872_1713
Type: CAZyme
Location: 1872637 - 1873404 (+)
Type: CAZyme
Location: 1872637 - 1873404 (+)
Gene ID: B57_contig_872_1714
Type: CAZyme
Location: 1873409 - 1874593 (+)
Type: CAZyme
Location: 1873409 - 1874593 (+)
Gene ID: B57_contig_872_1715
Type: CAZyme
Location: 1874607 - 1875389 (+)
Type: CAZyme
Location: 1874607 - 1875389 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp019423705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B57_contig_872_1708 | vegan > omnivore | 1.14297 | 0.04866 |
| B57_contig_872_1713 | vegan > omnivore | 2.77196 | 0.04866 |
| B57_contig_872_1714 | vegan > omnivore | 1.71415 | 0.04866 |