Cluster: B57.bin_8_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B57.bin_8
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B57_contig_872 | B57_contig_872_1469 | 1588565 | 1589212 | - | 2.A.115.2.9 |
| pfam | B57_contig_872 | B57_contig_872_1470 | 1589342 | 1590946 | - | PEPCK_ATP |
| CAZyme | B57_contig_872 | B57_contig_872_1471 | 1591356 | 1594118 | - | GH3 |
| STP | B57_contig_872 | B57_contig_872_1472 | 1594309 | 1595859 | - | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | B57_contig_872 | B57_contig_872_1473 | 1595843 | 1595995 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B57_contig_872 | B57_contig_872_1474 | 1596244 | 1598328 | - | GH3 |
Gene ID: B57_contig_872_1469
Type: TC
Location: 1588565 - 1589212 (-)
Type: TC
Location: 1588565 - 1589212 (-)
Gene ID: B57_contig_872_1470
Type: pfam
Location: 1589342 - 1590946 (-)
Type: pfam
Location: 1589342 - 1590946 (-)
Gene ID: B57_contig_872_1471
Type: CAZyme
Location: 1591356 - 1594118 (-)
Type: CAZyme
Location: 1591356 - 1594118 (-)
Gene ID: B57_contig_872_1472
Type: STP
Location: 1594309 - 1595859 (-)
Type: STP
Location: 1594309 - 1595859 (-)
Gene ID: B57_contig_872_1473
Type:
Location: 1595843 - 1595995 (-)
Type:
Location: 1595843 - 1595995 (-)
Gene ID: B57_contig_872_1474
Type: CAZyme
Location: 1596244 - 1598328 (-)
Type: CAZyme
Location: 1596244 - 1598328 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp019423705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B57_contig_872_1471 | vegan > omnivore | 1.31270 | 0.04866 |