Cluster: B57.bin_8_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: B57.bin_8
- CGC Family ID: CGCFAM_04623
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B57_contig_5668 | B57_contig_5668_24 | 28944 | 29780 | + | GT2 |
| pfam | B57_contig_5668 | B57_contig_5668_25 | 29781 | 30899 | + | Glyphos_transf |
| pfam | B57_contig_5668 | B57_contig_5668_26 | 30941 | 31795 | + | ABC2_membrane |
| TC | B57_contig_5668 | B57_contig_5668_27 | 31817 | 32548 | + | 3.A.1.103.6 |
| TC | B57_contig_5668 | B57_contig_5668_28 | 32781 | 35357 | - | 3.A.3.6.10 |
| TF | B57_contig_5668 | B57_contig_5668_29 | 35399 | 35818 | - | HTH_5 |
| TC | B57_contig_5668 | B57_contig_5668_30 | 36173 | 38551 | - | 3.A.9.1.2 |
Gene ID: B57_contig_5668_24
Type: CAZyme
Location: 28944 - 29780 (+)
Type: CAZyme
Location: 28944 - 29780 (+)
Gene ID: B57_contig_5668_25
Type: pfam
Location: 29781 - 30899 (+)
Type: pfam
Location: 29781 - 30899 (+)
Gene ID: B57_contig_5668_26
Type: pfam
Location: 30941 - 31795 (+)
Type: pfam
Location: 30941 - 31795 (+)
Gene ID: B57_contig_5668_27
Type: TC
Location: 31817 - 32548 (+)
Type: TC
Location: 31817 - 32548 (+)
Gene ID: B57_contig_5668_28
Type: TC
Location: 32781 - 35357 (-)
Type: TC
Location: 32781 - 35357 (-)
Gene ID: B57_contig_5668_29
Type: TF
Location: 35399 - 35818 (-)
Type: TF
Location: 35399 - 35818 (-)
Gene ID: B57_contig_5668_30
Type: TC
Location: 36173 - 38551 (-)
Type: TC
Location: 36173 - 38551 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Species
Hominimerdicola sp019423705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.