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Cluster: B57.bin_7_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B57_contig_1548 B57_contig_1548_956 1132553 1133704 + GT19
pfam B57_contig_1548 B57_contig_1548_957 1133734 1134480 + Pro_isomerase | Pro_isomerase
TF B57_contig_1548 B57_contig_1548_958 1134497 1134928 + FUR
TC B57_contig_1548 B57_contig_1548_959 1135241 1137124 + 3.A.3.6.10
pfam B57_contig_1548 B57_contig_1548_960 1137185 1139683 - DEAD | Helicase_C | HA2_N | HrpB_C
TC B57_contig_1548 B57_contig_1548_961 1139844 1141142 + 2.A.40.7.4
Gene ID: B57_contig_1548_956
Type: CAZyme
Location: 1132553 - 1133704 (+)
Gene ID: B57_contig_1548_957
Type: pfam
Location: 1133734 - 1134480 (+)
Gene ID: B57_contig_1548_958
Type: TF
Location: 1134497 - 1134928 (+)
Gene ID: B57_contig_1548_959
Type: TC
Location: 1135241 - 1137124 (+)
Gene ID: B57_contig_1548_960
Type: pfam
Location: 1137185 - 1139683 (-)
Gene ID: B57_contig_1548_961
Type: TC
Location: 1139844 - 1141142 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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