Cluster: B50.bin_27_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: B50.bin_27
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B50_contig_1658 | B50_contig_1658_13 | 10825 | 11907 | + | 9.B.146.1.6 |
| NULL(UNKNOWN) | B50_contig_1658 | B50_contig_1658_14 | 12056 | 12487 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B50_contig_1658 | B50_contig_1658_15 | 12551 | 13852 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | B50_contig_1658 | B50_contig_1658_16 | 13852 | 15033 | + | 2.A.103.1.1 |
| CAZyme | B50_contig_1658 | B50_contig_1658_17 | 15152 | 16207 | + | GT28 |
Gene ID: B50_contig_1658_13
Type: TC
Location: 10825 - 11907 (+)
Type: TC
Location: 10825 - 11907 (+)
Gene ID: B50_contig_1658_14
Type:
Location: 12056 - 12487 (+)
Type:
Location: 12056 - 12487 (+)
Gene ID: B50_contig_1658_15
Type: pfam
Location: 12551 - 13852 (+)
Type: pfam
Location: 12551 - 13852 (+)
Gene ID: B50_contig_1658_16
Type: TC
Location: 13852 - 15033 (+)
Type: TC
Location: 13852 - 15033 (+)
Gene ID: B50_contig_1658_17
Type: CAZyme
Location: 15152 - 16207 (+)
Type: CAZyme
Location: 15152 - 16207 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Species
Haemophilus_A sputorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.