Cluster: B50.bin_27_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B50.bin_27
- CGC Family ID: CGCFAM_00784
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B50_contig_2002 | B50_contig_2002_49 | 40205 | 41737 | + | GT2 |
| pfam | B50_contig_2002 | B50_contig_2002_50 | 42438 | 42587 | + | rve_2 |
| pfam | B50_contig_2002 | B50_contig_2002_51 | 42641 | 43780 | - | DUF2827 |
| TC | B50_contig_2002 | B50_contig_2002_52 | 43925 | 44371 | - | 1.B.40.1.5 |
Gene ID: B50_contig_2002_49
Type: CAZyme
Location: 40205 - 41737 (+)
Type: CAZyme
Location: 40205 - 41737 (+)
Gene ID: B50_contig_2002_50
Type: pfam
Location: 42438 - 42587 (+)
Type: pfam
Location: 42438 - 42587 (+)
Gene ID: B50_contig_2002_51
Type: pfam
Location: 42641 - 43780 (-)
Type: pfam
Location: 42641 - 43780 (-)
Gene ID: B50_contig_2002_52
Type: TC
Location: 43925 - 44371 (-)
Type: TC
Location: 43925 - 44371 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Species
Haemophilus_A sputorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.