Cluster: B50.bin_27_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: B50.bin_27
- CGC Family ID: CGCFAM_07521
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B50_contig_1650_corr_26_np12 | B50_contig_1650_corr_26_np12_31 | 32205 | 33347 | + | CE9 |
| TC | B50_contig_1650_corr_26_np12 | B50_contig_1650_corr_26_np12_32 | 33397 | 34080 | - | 3.A.1.3.3 |
| TC | B50_contig_1650_corr_26_np12 | B50_contig_1650_corr_26_np12_33 | 34080 | 34754 | - | 3.A.1.3.3 |
| TC | B50_contig_1650_corr_26_np12 | B50_contig_1650_corr_26_np12_34 | 34756 | 35481 | - | 3.A.1.3.3 |
| TC | B50_contig_1650_corr_26_np12 | B50_contig_1650_corr_26_np12_35 | 35511 | 36245 | - | 3.A.1.3.3 |
| TC | B50_contig_1650_corr_26_np12 | B50_contig_1650_corr_26_np12_36 | 36538 | 38202 | + | 5.A.1.1.1 |
Gene ID: B50_contig_1650_corr_26_np12_31
Type: CAZyme
Location: 32205 - 33347 (+)
Type: CAZyme
Location: 32205 - 33347 (+)
Gene ID: B50_contig_1650_corr_26_np12_32
Type: TC
Location: 33397 - 34080 (-)
Type: TC
Location: 33397 - 34080 (-)
Gene ID: B50_contig_1650_corr_26_np12_33
Type: TC
Location: 34080 - 34754 (-)
Type: TC
Location: 34080 - 34754 (-)
Gene ID: B50_contig_1650_corr_26_np12_34
Type: TC
Location: 34756 - 35481 (-)
Type: TC
Location: 34756 - 35481 (-)
Gene ID: B50_contig_1650_corr_26_np12_35
Type: TC
Location: 35511 - 36245 (-)
Type: TC
Location: 35511 - 36245 (-)
Gene ID: B50_contig_1650_corr_26_np12_36
Type: TC
Location: 36538 - 38202 (+)
Type: TC
Location: 36538 - 38202 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Species
Haemophilus_A sputorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.