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Cluster: B50.bin_27_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B50_contig_1654 B50_contig_1654_149 137666 138907 - 9.A.41.1.1
CAZyme B50_contig_1654 B50_contig_1654_150 138937 140979 - GT107 | GT107
NULL(UNKNOWN) B50_contig_1654 B50_contig_1654_151 141064 141684 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme B50_contig_1654 B50_contig_1654_152 141674 144301 - GT2
pfam B50_contig_1654 B50_contig_1654_153 144310 145410 - Stealth_CR2 | Stealth_CR1
TC B50_contig_1654 B50_contig_1654_154 145722 146906 + 1.B.18.2.4
TC B50_contig_1654 B50_contig_1654_155 146920 148053 + 8.A.4.2.1
TC B50_contig_1654 B50_contig_1654_156 148053 148850 + 3.A.1.101.3
TC B50_contig_1654 B50_contig_1654_157 148847 149500 + 3.A.1.101.3
pfam B50_contig_1654 B50_contig_1654_158 149587 149817 - UPF0547 | Zn_Ribbon_1
TC B50_contig_1654 B50_contig_1654_159 150077 151978 + 1.A.33.1.2
Gene ID: B50_contig_1654_149
Type: TC
Location: 137666 - 138907 (-)
Gene ID: B50_contig_1654_150
Type: CAZyme
Location: 138937 - 140979 (-)
Gene ID: B50_contig_1654_151
Type:
Location: 141064 - 141684 (-)
Gene ID: B50_contig_1654_152
Type: CAZyme
Location: 141674 - 144301 (-)
Gene ID: B50_contig_1654_153
Type: pfam
Location: 144310 - 145410 (-)
Gene ID: B50_contig_1654_154
Type: TC
Location: 145722 - 146906 (+)
Gene ID: B50_contig_1654_155
Type: TC
Location: 146920 - 148053 (+)
Gene ID: B50_contig_1654_156
Type: TC
Location: 148053 - 148850 (+)
Gene ID: B50_contig_1654_157
Type: TC
Location: 148847 - 149500 (+)
Gene ID: B50_contig_1654_158
Type: pfam
Location: 149587 - 149817 (-)
Gene ID: B50_contig_1654_159
Type: TC
Location: 150077 - 151978 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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