Cluster: B50.bin_27_CGC1
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 1
- Substrate:
- Genome ID: B50.bin_27
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B50_contig_3825 | B50_contig_3825_78 | 82635 | 84026 | - | 2.A.8.1.12 |
| NULL(UNKNOWN) | B50_contig_3825 | B50_contig_3825_79 | 84247 | 84510 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B50_contig_3825 | B50_contig_3825_80 | 84661 | 87237 | + | 3.A.9.1.2 |
| pfam | B50_contig_3825 | B50_contig_3825_81 | 87335 | 88198 | - | THF_DHG_CYH | THF_DHG_CYH_C |
| TC | B50_contig_3825 | B50_contig_3825_82 | 88830 | 89441 | + | 5.A.3.2.1 |
| TC | B50_contig_3825 | B50_contig_3825_83 | 89490 | 91928 | + | 5.A.3.2.1 |
| TC | B50_contig_3825 | B50_contig_3825_84 | 91930 | 92859 | + | 5.A.3.2.1 |
| TC | B50_contig_3825 | B50_contig_3825_85 | 92852 | 93574 | + | 5.A.3.2.1 |
| pfam | B50_contig_3825 | B50_contig_3825_86 | 93661 | 94572 | + | FdhE_N | FdhE_central | FdhE_C |
| TC | B50_contig_3825 | B50_contig_3825_87 | 94625 | 95431 | - | 3.A.1.24.1 |
| TC | B50_contig_3825 | B50_contig_3825_88 | 95542 | 96363 | - | 3.A.1.24.1 |
| TC | B50_contig_3825 | B50_contig_3825_89 | 96405 | 97082 | - | 3.A.1.24.3 |
| TC | B50_contig_3825 | B50_contig_3825_90 | 97072 | 98106 | - | 3.A.1.24.1 |
| TC | B50_contig_3825 | B50_contig_3825_91 | 98325 | 101462 | - | 1.B.40.2.2 |
| pfam | B50_contig_3825 | B50_contig_3825_92 | 101469 | 102152 | - | CFSR | CFSR | CFSR | CFSR |
| pfam | B50_contig_3825 | B50_contig_3825_93 | 102278 | 107830 | - | Collagen | Collagen | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | YadA_head | ESPR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR | CFSR |
| TC | B50_contig_3825 | B50_contig_3825_94 | 108121 | 108630 | + | 3.D.1.8.1 |
| STP | B50_contig_3825 | B50_contig_3825_95 | 108689 | 109936 | + | HD |
| pfam | B50_contig_3825 | B50_contig_3825_96 | 109977 | 111356 | - | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | tRNA-synt_1g | CysS_C |
| CAZyme | B50_contig_3825 | B50_contig_3825_97 | 111541 | 112149 | + | GT2 |
Gene ID: B50_contig_3825_78
Type: TC
Location: 82635 - 84026 (-)
Type: TC
Location: 82635 - 84026 (-)
Gene ID: B50_contig_3825_79
Type:
Location: 84247 - 84510 (+)
Type:
Location: 84247 - 84510 (+)
Gene ID: B50_contig_3825_80
Type: TC
Location: 84661 - 87237 (+)
Type: TC
Location: 84661 - 87237 (+)
Gene ID: B50_contig_3825_81
Type: pfam
Location: 87335 - 88198 (-)
Type: pfam
Location: 87335 - 88198 (-)
Gene ID: B50_contig_3825_82
Type: TC
Location: 88830 - 89441 (+)
Type: TC
Location: 88830 - 89441 (+)
Gene ID: B50_contig_3825_83
Type: TC
Location: 89490 - 91928 (+)
Type: TC
Location: 89490 - 91928 (+)
Gene ID: B50_contig_3825_84
Type: TC
Location: 91930 - 92859 (+)
Type: TC
Location: 91930 - 92859 (+)
Gene ID: B50_contig_3825_85
Type: TC
Location: 92852 - 93574 (+)
Type: TC
Location: 92852 - 93574 (+)
Gene ID: B50_contig_3825_86
Type: pfam
Location: 93661 - 94572 (+)
Type: pfam
Location: 93661 - 94572 (+)
Gene ID: B50_contig_3825_87
Type: TC
Location: 94625 - 95431 (-)
Type: TC
Location: 94625 - 95431 (-)
Gene ID: B50_contig_3825_88
Type: TC
Location: 95542 - 96363 (-)
Type: TC
Location: 95542 - 96363 (-)
Gene ID: B50_contig_3825_89
Type: TC
Location: 96405 - 97082 (-)
Type: TC
Location: 96405 - 97082 (-)
Gene ID: B50_contig_3825_90
Type: TC
Location: 97072 - 98106 (-)
Type: TC
Location: 97072 - 98106 (-)
Gene ID: B50_contig_3825_91
Type: TC
Location: 98325 - 101462 (-)
Type: TC
Location: 98325 - 101462 (-)
Gene ID: B50_contig_3825_92
Type: pfam
Location: 101469 - 102152 (-)
Type: pfam
Location: 101469 - 102152 (-)
Gene ID: B50_contig_3825_93
Type: pfam
Location: 102278 - 107830 (-)
Type: pfam
Location: 102278 - 107830 (-)
Gene ID: B50_contig_3825_94
Type: TC
Location: 108121 - 108630 (+)
Type: TC
Location: 108121 - 108630 (+)
Gene ID: B50_contig_3825_95
Type: STP
Location: 108689 - 109936 (+)
Type: STP
Location: 108689 - 109936 (+)
Gene ID: B50_contig_3825_96
Type: pfam
Location: 109977 - 111356 (-)
Type: pfam
Location: 109977 - 111356 (-)
Gene ID: B50_contig_3825_97
Type: CAZyme
Location: 111541 - 112149 (+)
Type: CAZyme
Location: 111541 - 112149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_A
Species
Haemophilus_A sputorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.