Cluster: B50.CMAG_4_CGC2
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: B50.CMAG_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B50_contig_4703 | B50_contig_4703_222 | 218140 | 220608 | - | GT35 |
| TC | B50_contig_4703 | B50_contig_4703_223 | 221091 | 223745 | - | 3.A.5.1.3 |
| NULL(UNKNOWN) | B50_contig_4703 | B50_contig_4703_224 | 223803 | 224201 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B50_contig_4703 | B50_contig_4703_225 | 224814 | 226235 | + | PLDc_2 |
| TC | B50_contig_4703 | B50_contig_4703_226 | 226269 | 226919 | + | 1.C.113.1.1 |
| TC | B50_contig_4703 | B50_contig_4703_227 | 227118 | 227636 | - | 3.D.1.8.1 |
| NULL(UNKNOWN) | B50_contig_4703 | B50_contig_4703_228 | 227661 | 228098 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B50_contig_4703 | B50_contig_4703_229 | 228163 | 229140 | - | Carboxyl_trans | ACCA |
| TC | B50_contig_4703 | B50_contig_4703_230 | 229174 | 230022 | - | 3.B.1.1.5 |
| pfam | B50_contig_4703 | B50_contig_4703_231 | 230134 | 231045 | - | PseudoU_synth_2 |
| TC | B50_contig_4703 | B50_contig_4703_232 | 231047 | 232162 | - | 2.A.103.1.2 |
Gene ID: B50_contig_4703_222
Type: CAZyme
Location: 218140 - 220608 (-)
Type: CAZyme
Location: 218140 - 220608 (-)
Gene ID: B50_contig_4703_223
Type: TC
Location: 221091 - 223745 (-)
Type: TC
Location: 221091 - 223745 (-)
Gene ID: B50_contig_4703_224
Type:
Location: 223803 - 224201 (-)
Type:
Location: 223803 - 224201 (-)
Gene ID: B50_contig_4703_225
Type: pfam
Location: 224814 - 226235 (+)
Type: pfam
Location: 224814 - 226235 (+)
Gene ID: B50_contig_4703_226
Type: TC
Location: 226269 - 226919 (+)
Type: TC
Location: 226269 - 226919 (+)
Gene ID: B50_contig_4703_227
Type: TC
Location: 227118 - 227636 (-)
Type: TC
Location: 227118 - 227636 (-)
Gene ID: B50_contig_4703_228
Type:
Location: 227661 - 228098 (-)
Type:
Location: 227661 - 228098 (-)
Gene ID: B50_contig_4703_229
Type: pfam
Location: 228163 - 229140 (-)
Type: pfam
Location: 228163 - 229140 (-)
Gene ID: B50_contig_4703_230
Type: TC
Location: 229174 - 230022 (-)
Type: TC
Location: 229174 - 230022 (-)
Gene ID: B50_contig_4703_231
Type: pfam
Location: 230134 - 231045 (-)
Type: pfam
Location: 230134 - 231045 (-)
Gene ID: B50_contig_4703_232
Type: TC
Location: 231047 - 232162 (-)
Type: TC
Location: 231047 - 232162 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Leptotrichiaceae
Genus
JABCPH02
Species
JABCPH02 sp013333235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.