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Cluster: B46.bin_5_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B46_contig_283 B46_contig_283_1600 1738950 1739996 - GH170
TC B46_contig_283 B46_contig_283_1601 1739989 1741419 - 4.A.1.2.7
STP B46_contig_283 B46_contig_283_1602 1741530 1742426 - SIS
TC B46_contig_283 B46_contig_283_1603 1742932 1743453 + 4.A.1.2.11
STP B46_contig_283 B46_contig_283_1604 1743489 1743746 + PTS-HPr
TC B46_contig_283 B46_contig_283_1605 1743764 1745383 + 8.A.7.1.1
Gene ID: B46_contig_283_1600
Type: CAZyme
Location: 1738950 - 1739996 (-)
Gene ID: B46_contig_283_1601
Type: TC
Location: 1739989 - 1741419 (-)
Gene ID: B46_contig_283_1602
Type: STP
Location: 1741530 - 1742426 (-)
Gene ID: B46_contig_283_1603
Type: TC
Location: 1742932 - 1743453 (+)
Gene ID: B46_contig_283_1604
Type: STP
Location: 1743489 - 1743746 (+)
Gene ID: B46_contig_283_1605
Type: TC
Location: 1743764 - 1745383 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B46_contig_283_1605 vegan > omnivore 1.07144 0.00863

🧭 Explore Read Mapping of CGC

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