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Cluster: B43.CMAG_3_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B43_contig_1353 B43_contig_1353_470 528437 529609 + GT2
NULL(UNKNOWN) B43_contig_1353 B43_contig_1353_471 529713 529904 + NULL(UNKNOWN)
[View Structural Homologs]
pfam B43_contig_1353 B43_contig_1353_472 530006 530329 + Alpha-amylase | Malt_amylase_C | SusG_C
CAZyme B43_contig_1353 B43_contig_1353_473 530517 532400 - GH18
NULL(UNKNOWN) B43_contig_1353 B43_contig_1353_474 532755 532877 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme B43_contig_1353 B43_contig_1353_475 532900 533982 - GH179
pfam B43_contig_1353 B43_contig_1353_476 534019 534951 - AP_endonuc_2
TC B43_contig_1353 B43_contig_1353_477 534988 535854 - 3.A.1.1.25
TC B43_contig_1353 B43_contig_1353_478 535872 536777 - 3.A.1.1.7
TC B43_contig_1353 B43_contig_1353_479 536873 538204 - 3.A.1.1.16
TF B43_contig_1353 B43_contig_1353_480 538348 539190 - HTH_AraC | HTH_AraC
STP B43_contig_1353 B43_contig_1353_481 540239 541579 + SBP_bac_1
TC B43_contig_1353 B43_contig_1353_482 541726 542598 + 3.A.1.1.47
TC B43_contig_1353 B43_contig_1353_483 542595 543467 + 3.A.1.1.47
Gene ID: B43_contig_1353_470
Type: CAZyme
Location: 528437 - 529609 (+)
Gene ID: B43_contig_1353_471
Type:
Location: 529713 - 529904 (+)
Gene ID: B43_contig_1353_472
Type: pfam
Location: 530006 - 530329 (+)
Gene ID: B43_contig_1353_473
Type: CAZyme
Location: 530517 - 532400 (-)
Gene ID: B43_contig_1353_474
Type:
Location: 532755 - 532877 (+)
Gene ID: B43_contig_1353_475
Type: CAZyme
Location: 532900 - 533982 (-)
Gene ID: B43_contig_1353_476
Type: pfam
Location: 534019 - 534951 (-)
Gene ID: B43_contig_1353_477
Type: TC
Location: 534988 - 535854 (-)
Gene ID: B43_contig_1353_478
Type: TC
Location: 535872 - 536777 (-)
Gene ID: B43_contig_1353_479
Type: TC
Location: 536873 - 538204 (-)
Gene ID: B43_contig_1353_480
Type: TF
Location: 538348 - 539190 (-)
Gene ID: B43_contig_1353_481
Type: STP
Location: 540239 - 541579 (+)
Gene ID: B43_contig_1353_482
Type: TC
Location: 541726 - 542598 (+)
Gene ID: B43_contig_1353_483
Type: TC
Location: 542595 - 543467 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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