Cluster: B43.CMAG_3_CGC5
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 7
- Substrate:
- Genome ID: B43.CMAG_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B43_contig_1353 | B43_contig_1353_446 | 490113 | 491024 | + | 3.A.1.1.25 |
| TC | B43_contig_1353 | B43_contig_1353_447 | 491039 | 491875 | + | 3.A.1.1.36 |
| NULL(UNKNOWN) | B43_contig_1353 | B43_contig_1353_448 | 491905 | 492969 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | B43_contig_1353 | B43_contig_1353_449 | 493122 | 494159 | - | LacI |
| CAZyme | B43_contig_1353 | B43_contig_1353_450 | 494294 | 495379 | + | GH172 |
| TC | B43_contig_1353 | B43_contig_1353_451 | 496434 | 498197 | - | 8.A.59.2.1 |
| TF | B43_contig_1353 | B43_contig_1353_452 | 498187 | 499749 | - | HTH_AraC | HTH_AraC |
| TC | B43_contig_1353 | B43_contig_1353_453 | 500129 | 501091 | + | 3.A.1.1.29 |
| TC | B43_contig_1353 | B43_contig_1353_454 | 501112 | 501993 | + | 3.A.1.1.29 |
| pfam | B43_contig_1353 | B43_contig_1353_455 | 502055 | 503596 | + | DUF3502 |
| CAZyme | B43_contig_1353 | B43_contig_1353_456 | 503689 | 507765 | + | GH141 |
| pfam | B43_contig_1353 | B43_contig_1353_457 | 507969 | 508607 | + | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | B43_contig_1353 | B43_contig_1353_458 | 508622 | 510907 | + | GH94 |
| CAZyme | B43_contig_1353 | B43_contig_1353_459 | 510879 | 512891 | + | GH151 |
| pfam | B43_contig_1353 | B43_contig_1353_460 | 513503 | 518446 | + | Metallophos | LTD | Big_3 | Bact_surface_Ig-like |
| NULL(UNKNOWN) | B43_contig_1353 | B43_contig_1353_461 | 518673 | 518948 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B43_contig_1353 | B43_contig_1353_462 | 519296 | 520027 | + | GT26 |
| pfam | B43_contig_1353 | B43_contig_1353_463 | 520020 | 521144 | + | Epimerase_2 |
| CAZyme | B43_contig_1353 | B43_contig_1353_464 | 521149 | 521862 | + | GT32 |
| CAZyme | B43_contig_1353 | B43_contig_1353_465 | 521868 | 522917 | + | GT4 |
Gene ID: B43_contig_1353_446
Type: TC
Location: 490113 - 491024 (+)
Type: TC
Location: 490113 - 491024 (+)
Gene ID: B43_contig_1353_447
Type: TC
Location: 491039 - 491875 (+)
Type: TC
Location: 491039 - 491875 (+)
Gene ID: B43_contig_1353_448
Type:
Location: 491905 - 492969 (+)
Type:
Location: 491905 - 492969 (+)
Gene ID: B43_contig_1353_449
Type: TF
Location: 493122 - 494159 (-)
Type: TF
Location: 493122 - 494159 (-)
Gene ID: B43_contig_1353_450
Type: CAZyme
Location: 494294 - 495379 (+)
Type: CAZyme
Location: 494294 - 495379 (+)
Gene ID: B43_contig_1353_451
Type: TC
Location: 496434 - 498197 (-)
Type: TC
Location: 496434 - 498197 (-)
Gene ID: B43_contig_1353_452
Type: TF
Location: 498187 - 499749 (-)
Type: TF
Location: 498187 - 499749 (-)
Gene ID: B43_contig_1353_453
Type: TC
Location: 500129 - 501091 (+)
Type: TC
Location: 500129 - 501091 (+)
Gene ID: B43_contig_1353_454
Type: TC
Location: 501112 - 501993 (+)
Type: TC
Location: 501112 - 501993 (+)
Gene ID: B43_contig_1353_455
Type: pfam
Location: 502055 - 503596 (+)
Type: pfam
Location: 502055 - 503596 (+)
Gene ID: B43_contig_1353_456
Type: CAZyme
Location: 503689 - 507765 (+)
Type: CAZyme
Location: 503689 - 507765 (+)
Gene ID: B43_contig_1353_457
Type: pfam
Location: 507969 - 508607 (+)
Type: pfam
Location: 507969 - 508607 (+)
Gene ID: B43_contig_1353_458
Type: CAZyme
Location: 508622 - 510907 (+)
Type: CAZyme
Location: 508622 - 510907 (+)
Gene ID: B43_contig_1353_459
Type: CAZyme
Location: 510879 - 512891 (+)
Type: CAZyme
Location: 510879 - 512891 (+)
Gene ID: B43_contig_1353_460
Type: pfam
Location: 513503 - 518446 (+)
Type: pfam
Location: 513503 - 518446 (+)
Gene ID: B43_contig_1353_461
Type:
Location: 518673 - 518948 (+)
Type:
Location: 518673 - 518948 (+)
Gene ID: B43_contig_1353_462
Type: CAZyme
Location: 519296 - 520027 (+)
Type: CAZyme
Location: 519296 - 520027 (+)
Gene ID: B43_contig_1353_463
Type: pfam
Location: 520020 - 521144 (+)
Type: pfam
Location: 520020 - 521144 (+)
Gene ID: B43_contig_1353_464
Type: CAZyme
Location: 521149 - 521862 (+)
Type: CAZyme
Location: 521149 - 521862 (+)
Gene ID: B43_contig_1353_465
Type: CAZyme
Location: 521868 - 522917 (+)
Type: CAZyme
Location: 521868 - 522917 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A leptum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.