Cluster: B43.CMAG_3_CGC43
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: B43.CMAG_3
- CGC Family ID: CGCFAM_07511
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B43_contig_1353 | B43_contig_1353_2440 | 2700192 | 2701985 | - | GH43_27 |
| CAZyme | B43_contig_1353 | B43_contig_1353_2441 | 2702158 | 2704419 | - | GH95 |
| TC | B43_contig_1353 | B43_contig_1353_2442 | 2704927 | 2705850 | - | 8.A.5.1.7 |
| TC | B43_contig_1353 | B43_contig_1353_2443 | 2705985 | 2706959 | - | 8.A.5.1.3 |
| CAZyme | B43_contig_1353 | B43_contig_1353_2444 | 2707012 | 2707986 | - | GH5 |
| CAZyme | B43_contig_1353 | B43_contig_1353_2445 | 2708005 | 2708964 | - | GH105 |
| TC | B43_contig_1353 | B43_contig_1353_2446 | 2708970 | 2709806 | - | 3.A.1.1.34 |
| TC | B43_contig_1353 | B43_contig_1353_2447 | 2709822 | 2710712 | - | 3.A.1.1.20 |
| TC | B43_contig_1353 | B43_contig_1353_2448 | 2710802 | 2712115 | - | 3.A.1.1.3 |
| CAZyme | B43_contig_1353 | B43_contig_1353_2449 | 2712245 | 2713744 | - | GH51_1 |
| CAZyme | B43_contig_1353 | B43_contig_1353_2450 | 2714264 | 2715772 | + | GH51_1 |
| TF | B43_contig_1353 | B43_contig_1353_2451 | 2716122 | 2717156 | + | LacI |
| pfam | B43_contig_1353 | B43_contig_1353_2452 | 2717203 | 2718156 | + | IU_nuc_hydro |
| CAZyme | B43_contig_1353 | B43_contig_1353_2453 | 2718304 | 2719791 | + | GH51_1 |
Gene ID: B43_contig_1353_2440
Type: CAZyme
Location: 2700192 - 2701985 (-)
Type: CAZyme
Location: 2700192 - 2701985 (-)
Gene ID: B43_contig_1353_2441
Type: CAZyme
Location: 2702158 - 2704419 (-)
Type: CAZyme
Location: 2702158 - 2704419 (-)
Gene ID: B43_contig_1353_2442
Type: TC
Location: 2704927 - 2705850 (-)
Type: TC
Location: 2704927 - 2705850 (-)
Gene ID: B43_contig_1353_2443
Type: TC
Location: 2705985 - 2706959 (-)
Type: TC
Location: 2705985 - 2706959 (-)
Gene ID: B43_contig_1353_2444
Type: CAZyme
Location: 2707012 - 2707986 (-)
Type: CAZyme
Location: 2707012 - 2707986 (-)
Gene ID: B43_contig_1353_2445
Type: CAZyme
Location: 2708005 - 2708964 (-)
Type: CAZyme
Location: 2708005 - 2708964 (-)
Gene ID: B43_contig_1353_2446
Type: TC
Location: 2708970 - 2709806 (-)
Type: TC
Location: 2708970 - 2709806 (-)
Gene ID: B43_contig_1353_2447
Type: TC
Location: 2709822 - 2710712 (-)
Type: TC
Location: 2709822 - 2710712 (-)
Gene ID: B43_contig_1353_2448
Type: TC
Location: 2710802 - 2712115 (-)
Type: TC
Location: 2710802 - 2712115 (-)
Gene ID: B43_contig_1353_2449
Type: CAZyme
Location: 2712245 - 2713744 (-)
Type: CAZyme
Location: 2712245 - 2713744 (-)
Gene ID: B43_contig_1353_2450
Type: CAZyme
Location: 2714264 - 2715772 (+)
Type: CAZyme
Location: 2714264 - 2715772 (+)
Gene ID: B43_contig_1353_2451
Type: TF
Location: 2716122 - 2717156 (+)
Type: TF
Location: 2716122 - 2717156 (+)
Gene ID: B43_contig_1353_2452
Type: pfam
Location: 2717203 - 2718156 (+)
Type: pfam
Location: 2717203 - 2718156 (+)
Gene ID: B43_contig_1353_2453
Type: CAZyme
Location: 2718304 - 2719791 (+)
Type: CAZyme
Location: 2718304 - 2719791 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A leptum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.