Cluster: B43.CMAG_3_CGC40
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 3
- Substrate:
- Genome ID: B43.CMAG_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B43_contig_1353 | B43_contig_1353_2317 | 2569589 | 2571913 | - | GH2 |
| TC | B43_contig_1353 | B43_contig_1353_2318 | 2572656 | 2573495 | - | 3.A.1.1.49 |
| TC | B43_contig_1353 | B43_contig_1353_2319 | 2573512 | 2574387 | - | 3.A.1.1.5 |
| STP | B43_contig_1353 | B43_contig_1353_2320 | 2574464 | 2575858 | - | SBP_bac_1 |
| pfam | B43_contig_1353 | B43_contig_1353_2321 | 2576087 | 2577190 | - | ADH_zinc_N | ADH_N |
| CAZyme | B43_contig_1353 | B43_contig_1353_2322 | 2578872 | 2580629 | - | GH2 |
| NULL(UNKNOWN) | B43_contig_1353 | B43_contig_1353_2323 | 2580837 | 2582438 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B43_contig_1353 | B43_contig_1353_2324 | 2582459 | 2583295 | - | 3.A.1.1.47 |
| TC | B43_contig_1353 | B43_contig_1353_2325 | 2583292 | 2584173 | - | 3.A.1.1.21 |
| STP | B43_contig_1353 | B43_contig_1353_2326 | 2584232 | 2585602 | - | SBP_bac_1 |
| TC | B43_contig_1353 | B43_contig_1353_2327 | 2585844 | 2587613 | + | 8.A.59.2.1 |
| TF | B43_contig_1353 | B43_contig_1353_2328 | 2587630 | 2589186 | + | HTH_AraC | HTH_AraC |
| CAZyme | B43_contig_1353 | B43_contig_1353_2329 | 2590157 | 2592088 | - | GH127 |
| TC | B43_contig_1353 | B43_contig_1353_2330 | 2592109 | 2592900 | - | 3.A.1.1.47 |
| TC | B43_contig_1353 | B43_contig_1353_2331 | 2592951 | 2593835 | - | 3.A.1.1.20 |
| STP | B43_contig_1353 | B43_contig_1353_2332 | 2593912 | 2595255 | - | SBP_bac_1 |
| TC | B43_contig_1353 | B43_contig_1353_2333 | 2595457 | 2597196 | + | 9.B.33.1.1 |
Gene ID: B43_contig_1353_2317
Type: CAZyme
Location: 2569589 - 2571913 (-)
Type: CAZyme
Location: 2569589 - 2571913 (-)
Gene ID: B43_contig_1353_2318
Type: TC
Location: 2572656 - 2573495 (-)
Type: TC
Location: 2572656 - 2573495 (-)
Gene ID: B43_contig_1353_2319
Type: TC
Location: 2573512 - 2574387 (-)
Type: TC
Location: 2573512 - 2574387 (-)
Gene ID: B43_contig_1353_2320
Type: STP
Location: 2574464 - 2575858 (-)
Type: STP
Location: 2574464 - 2575858 (-)
Gene ID: B43_contig_1353_2321
Type: pfam
Location: 2576087 - 2577190 (-)
Type: pfam
Location: 2576087 - 2577190 (-)
Gene ID: B43_contig_1353_2322
Type: CAZyme
Location: 2578872 - 2580629 (-)
Type: CAZyme
Location: 2578872 - 2580629 (-)
Gene ID: B43_contig_1353_2323
Type:
Location: 2580837 - 2582438 (-)
Type:
Location: 2580837 - 2582438 (-)
Gene ID: B43_contig_1353_2324
Type: TC
Location: 2582459 - 2583295 (-)
Type: TC
Location: 2582459 - 2583295 (-)
Gene ID: B43_contig_1353_2325
Type: TC
Location: 2583292 - 2584173 (-)
Type: TC
Location: 2583292 - 2584173 (-)
Gene ID: B43_contig_1353_2326
Type: STP
Location: 2584232 - 2585602 (-)
Type: STP
Location: 2584232 - 2585602 (-)
Gene ID: B43_contig_1353_2327
Type: TC
Location: 2585844 - 2587613 (+)
Type: TC
Location: 2585844 - 2587613 (+)
Gene ID: B43_contig_1353_2328
Type: TF
Location: 2587630 - 2589186 (+)
Type: TF
Location: 2587630 - 2589186 (+)
Gene ID: B43_contig_1353_2329
Type: CAZyme
Location: 2590157 - 2592088 (-)
Type: CAZyme
Location: 2590157 - 2592088 (-)
Gene ID: B43_contig_1353_2330
Type: TC
Location: 2592109 - 2592900 (-)
Type: TC
Location: 2592109 - 2592900 (-)
Gene ID: B43_contig_1353_2331
Type: TC
Location: 2592951 - 2593835 (-)
Type: TC
Location: 2592951 - 2593835 (-)
Gene ID: B43_contig_1353_2332
Type: STP
Location: 2593912 - 2595255 (-)
Type: STP
Location: 2593912 - 2595255 (-)
Gene ID: B43_contig_1353_2333
Type: TC
Location: 2595457 - 2597196 (+)
Type: TC
Location: 2595457 - 2597196 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A leptum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.