Cluster: B43.CMAG_3_CGC37
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 4
- Substrate:
- Genome ID: B43.CMAG_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B43_contig_1353 | B43_contig_1353_2246 | 2472584 | 2473297 | - | 3.A.1.30.1 |
| TC | B43_contig_1353 | B43_contig_1353_2247 | 2473285 | 2474829 | - | 3.A.1.30.1 |
| TC | B43_contig_1353 | B43_contig_1353_2248 | 2474822 | 2475415 | - | 3.A.1.30.1 |
| pfam | B43_contig_1353 | B43_contig_1353_2249 | 2475647 | 2476276 | - | Ykof | Ykof |
| CAZyme | B43_contig_1353 | B43_contig_1353_2250 | 2476778 | 2478778 | - | GH31_4 |
| TC | B43_contig_1353 | B43_contig_1353_2251 | 2478897 | 2479745 | - | 3.A.1.1.41 |
| TC | B43_contig_1353 | B43_contig_1353_2252 | 2479745 | 2480644 | - | 3.A.1.1.7 |
| CAZyme | B43_contig_1353 | B43_contig_1353_2253 | 2481189 | 2487173 | - | CBM35 |
| STP | B43_contig_1353 | B43_contig_1353_2254 | 2487415 | 2488701 | - | SBP_bac_1 |
| TF | B43_contig_1353 | B43_contig_1353_2255 | 2488882 | 2490426 | - | HTH_AraC | HTH_AraC |
| TC | B43_contig_1353 | B43_contig_1353_2256 | 2490441 | 2492243 | - | 8.A.59.2.1 |
| CAZyme | B43_contig_1353 | B43_contig_1353_2257 | 2492980 | 2494677 | - | GH13_31 |
| CAZyme | B43_contig_1353 | B43_contig_1353_2258 | 2494760 | 2496682 | - | GH32 |
| TC | B43_contig_1353 | B43_contig_1353_2259 | 2496690 | 2497508 | - | 3.A.1.1.39 |
| TC | B43_contig_1353 | B43_contig_1353_2260 | 2497522 | 2498406 | - | 3.A.1.1.42 |
| STP | B43_contig_1353 | B43_contig_1353_2261 | 2498493 | 2499824 | - | SBP_bac_1 |
| STP | B43_contig_1353 | B43_contig_1353_2262 | 2499970 | 2500614 | + | dCache_1 |
| TC | B43_contig_1353 | B43_contig_1353_2263 | 2500615 | 2501874 | + | 8.A.59.2.1 |
| TF | B43_contig_1353 | B43_contig_1353_2264 | 2501852 | 2503462 | + | HTH_AraC | HTH_AraC |
| TF | B43_contig_1353 | B43_contig_1353_2265 | 2503521 | 2504351 | - | MerR |
| TC | B43_contig_1353 | B43_contig_1353_2266 | 2504438 | 2505769 | + | 2.A.66.1.37 |
Gene ID: B43_contig_1353_2246
Type: TC
Location: 2472584 - 2473297 (-)
Type: TC
Location: 2472584 - 2473297 (-)
Gene ID: B43_contig_1353_2247
Type: TC
Location: 2473285 - 2474829 (-)
Type: TC
Location: 2473285 - 2474829 (-)
Gene ID: B43_contig_1353_2248
Type: TC
Location: 2474822 - 2475415 (-)
Type: TC
Location: 2474822 - 2475415 (-)
Gene ID: B43_contig_1353_2249
Type: pfam
Location: 2475647 - 2476276 (-)
Type: pfam
Location: 2475647 - 2476276 (-)
Gene ID: B43_contig_1353_2250
Type: CAZyme
Location: 2476778 - 2478778 (-)
Type: CAZyme
Location: 2476778 - 2478778 (-)
Gene ID: B43_contig_1353_2251
Type: TC
Location: 2478897 - 2479745 (-)
Type: TC
Location: 2478897 - 2479745 (-)
Gene ID: B43_contig_1353_2252
Type: TC
Location: 2479745 - 2480644 (-)
Type: TC
Location: 2479745 - 2480644 (-)
Gene ID: B43_contig_1353_2253
Type: CAZyme
Location: 2481189 - 2487173 (-)
Type: CAZyme
Location: 2481189 - 2487173 (-)
Gene ID: B43_contig_1353_2254
Type: STP
Location: 2487415 - 2488701 (-)
Type: STP
Location: 2487415 - 2488701 (-)
Gene ID: B43_contig_1353_2255
Type: TF
Location: 2488882 - 2490426 (-)
Type: TF
Location: 2488882 - 2490426 (-)
Gene ID: B43_contig_1353_2256
Type: TC
Location: 2490441 - 2492243 (-)
Type: TC
Location: 2490441 - 2492243 (-)
Gene ID: B43_contig_1353_2257
Type: CAZyme
Location: 2492980 - 2494677 (-)
Type: CAZyme
Location: 2492980 - 2494677 (-)
Gene ID: B43_contig_1353_2258
Type: CAZyme
Location: 2494760 - 2496682 (-)
Type: CAZyme
Location: 2494760 - 2496682 (-)
Gene ID: B43_contig_1353_2259
Type: TC
Location: 2496690 - 2497508 (-)
Type: TC
Location: 2496690 - 2497508 (-)
Gene ID: B43_contig_1353_2260
Type: TC
Location: 2497522 - 2498406 (-)
Type: TC
Location: 2497522 - 2498406 (-)
Gene ID: B43_contig_1353_2261
Type: STP
Location: 2498493 - 2499824 (-)
Type: STP
Location: 2498493 - 2499824 (-)
Gene ID: B43_contig_1353_2262
Type: STP
Location: 2499970 - 2500614 (+)
Type: STP
Location: 2499970 - 2500614 (+)
Gene ID: B43_contig_1353_2263
Type: TC
Location: 2500615 - 2501874 (+)
Type: TC
Location: 2500615 - 2501874 (+)
Gene ID: B43_contig_1353_2264
Type: TF
Location: 2501852 - 2503462 (+)
Type: TF
Location: 2501852 - 2503462 (+)
Gene ID: B43_contig_1353_2265
Type: TF
Location: 2503521 - 2504351 (-)
Type: TF
Location: 2503521 - 2504351 (-)
Gene ID: B43_contig_1353_2266
Type: TC
Location: 2504438 - 2505769 (+)
Type: TC
Location: 2504438 - 2505769 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A leptum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.